RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 PRKYO43930 277 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 FAM107AO95990 144 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 CXCR4P61073 352 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 ESRRGP62508 458 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 BCL2L15Q5TBC7 163 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 ZNF322Q6U7Q0 402 aaPredicted RBP17.87■□□□□ 0.45
HDDC3-203ENST00000494993 SPATA24Q86W54 205 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 ELMOD2Q8IZ81 293 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 OR14K1Q8NGZ2 314 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 APOL4Q9BPW4 351 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 ZNF702PQ9H963 129 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 OR52A1Q9UKL2 312 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 R4GMQ9 66 aa17.87■□□□□ 0.45
HDDC3-203ENST00000494993 A0A1B0GTI1 187 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 C17orf98A8MV24 154 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 MAGEB4O15481 346 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-203ENST00000494993 PIPP12273 146 aaPredicted RBP17.86■□□□□ 0.45
HDDC3-203ENST00000494993 DLX6P56179 175 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 ACTR3P61158 418 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 ERVK11-1P61568 191 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 PTGES3Q15185 160 aaKnown RBP17.86■□□□□ 0.45
HDDC3-203ENST00000494993 MEPCEQ7L2J0 689 aaKnown RBP17.86■□□□□ 0.45
HDDC3-203ENST00000494993 DYNAPQ8N1N2 210 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 NRBF2Q96F24 287 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 TCF19Q9Y242 345 aa17.86■□□□□ 0.45
HDDC3-203ENST00000494993 DHRS7CA6NNS2 312 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 K7N7A8 449 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 FLOT2Q14254 428 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 PLA1AQ53H76 456 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 FBLN7Q53RD9 439 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 FAHD1Q6P587 224 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 PLEKHG7Q6ZR37 379 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 Q6ZSR3 168 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 BCDIN3DQ7Z5W3 292 aaKnown RBP17.85■□□□□ 0.45
HDDC3-203ENST00000494993 SLC35F2Q8IXU6 374 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 FOXRED1Q96CU9 486 aaPredicted RBP17.85■□□□□ 0.45
HDDC3-203ENST00000494993 MNTQ99583 582 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 CDCA4Q9BXL8 241 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 PRRG3Q9BZD7 231 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 PKIBQ9C010 78 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 SERTAD4Q9NUC0 356 aa17.85■□□□□ 0.45
HDDC3-203ENST00000494993 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.85■□□□□ 0.45
HDDC3-203ENST00000494993 TBL2Q9Y4P3 447 aaKnown RBP17.85■□□□□ 0.45
HDDC3-203ENST00000494993 TCRBV3S1A0A5B6 114 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 A6NIN4 97 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 ODF3BA8MYP8 253 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 M0R129 80 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 DAPP51397 102 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 COL10A1Q03692 680 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 IL24Q13007 206 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 HABP2Q14520 560 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-203ENST00000494993 CCBE1Q6UXH8 406 aaPredicted RBP17.84■□□□□ 0.45
HDDC3-203ENST00000494993 ANGPTL5Q86XS5 388 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 LYG1Q8N1E2 194 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 Q8N2B8 174 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 ASCC1Q8N9N2 400 aaKnown RBP17.84■□□□□ 0.45
HDDC3-203ENST00000494993 OR13D1Q8NGV5 346 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 ADGRL4Q9HBW9 690 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 MRM2Q9UI43 246 aaKnown RBP17.84■□□□□ 0.45
HDDC3-203ENST00000494993 SNX5Q9Y5X3 404 aa17.84■□□□□ 0.45
HDDC3-203ENST00000494993 ZNF670-ZNF695F2Z2N8 137 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 FBXO24O75426 580 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 RBP4P02753 201 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 PRB2P02812 416 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-203ENST00000494993 ARG1P05089 322 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 RAB13P51153 203 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 FAM189A2Q15884 450 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 AADACL4Q5VUY2 407 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 NXNL2Q5VZ03 156 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 ZNF626Q68DY1 528 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 TRMT10AQ8TBZ6 339 aaKnown RBP17.83■□□□□ 0.44
HDDC3-203ENST00000494993 RPS4Y2Q8TD47 263 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 MALSU1Q96EH3 234 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 ABCB10Q9NRK6 738 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 CLN6Q9NWW5 311 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 H2AFY2Q9P0M6 372 aaPredicted RBP17.83■□□□□ 0.44
HDDC3-203ENST00000494993 SLC22A13Q9Y226 551 aa17.83■□□□□ 0.44
HDDC3-203ENST00000494993 DNAH3Q8TD57 4116 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 A6NDX4 124 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 ZNF737O75373 536 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 CHRM2P08172 466 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 ZNF728P0DKX0 622 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 CCL1P22362 96 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 CNN3Q15417 329 aaKnown RBP17.82■□□□□ 0.44
HDDC3-203ENST00000494993 NSUN5P1Q3KNT7 163 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 TMEM219Q86XT9 240 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 TCEANCQ8N8B7 351 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 PITPNC1Q9UKF7 332 aa17.82■□□□□ 0.44
HDDC3-203ENST00000494993 KIAA2026Q5HYC2 2103 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 FAM230AA0A1W2PPH8 454 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 MEX3AA1L020 520 aaKnown RBP17.81■□□□□ 0.44
HDDC3-203ENST00000494993 IGHV1-8P0DP01 117 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 CD28P10747 220 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 EDDM3BP56851 147 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 EFNB1P98172 346 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 SSX2Q16385 188 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 DNAL1Q4LDG9 190 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 LDLRAD2Q5SZI1 272 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 SLX4IPQ5VYV7 408 aa17.81■□□□□ 0.44
HDDC3-203ENST00000494993 Q6ZPA2 131 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms