RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 V9GYS6 101 aa13.41□□□□□ -0.26
SDF4-207ENST00000494748 A0A1B0GV50 99 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 TCRBV21S2A2A0A5A6 115 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 TLCD2A6NGC4 264 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 ERVFRD-1P60508 538 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 PPA1Q15181 289 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 TSPO2Q5TGU0 170 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 TMEM182Q6ZP80 229 aaPredicted RBP13.4□□□□□ -0.26
SDF4-207ENST00000494748 STT3BQ8TCJ2 826 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 C14orf144Q96I85 54 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 VN1R1Q9GZP7 353 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 HS3ST3B1Q9Y662 390 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 GPR37O15354 613 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 Q6ZSR3 168 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 PRSS58Q8IYP2 241 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 POC1BQ8TC44 478 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 RAB39BQ96DA2 213 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 Q96M66 194 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 PBDC1Q9BVG4 233 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 OPA3Q9H6K4 179 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 PARPBPQ9NWS1 579 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 BRWD1Q9NSI6 2320 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 LY86O95711 162 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 GIMD1P0DJR0 217 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 RPS10P46783 165 aaKnown RBP13.4□□□□□ -0.26
SDF4-207ENST00000494748 MYBPHQ13203 477 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 OR2AJ1Q8NGZ0 328 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 RNF138Q8WVD3 245 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 SLAMF9Q96A28 289 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 DDIT4LQ96D03 193 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 UCK1Q9HA47 277 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 COPS7AQ9UBW8 275 aa13.4□□□□□ -0.26
SDF4-207ENST00000494748 WDFY3Q8IZQ1 3526 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 CFAP54Q96N23 3096 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 LILRA5A6NI73 299 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 H3BQ15 152 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BKO60814 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BJP06899 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 KLK2P20151 261 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BOP23527 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 CTSSP25774 331 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BBP33778 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BDP58876 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BCP62807 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST2H2BEQ16778 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 RSPO1Q2MKA7 263 aaPredicted RBP13.39□□□□□ -0.27
SDF4-207ENST00000494748 SOHLH1Q5JUK2 328 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.39□□□□□ -0.27
SDF4-207ENST00000494748 OR4D5Q8NGN0 318 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BHQ93079 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BNQ99877 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H2BMQ99879 126 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 SMDT1Q9H4I9 107 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 A0A087WWC5 75 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 NSG1A0A0A6YYJ2 146 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 OR5H8P0DN80 308 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 ASCL1P50553 236 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 RRADP55042 308 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 CLRN1P58418 232 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 GFI1BQ5VTD9 330 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 LFNGQ8NES3 379 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 BOD1Q96IK1 185 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 IGFLR1Q9H665 355 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 TCFL5Q9UL49 500 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 SHANK1Q9Y566 2161 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 EML6Q6ZMW3 1958 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 CCDC187A0A096LP49 1063 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 PRH1P02810 166 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 SOD3P08294 240 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 SRP19P09132 144 aaKnown RBP13.39□□□□□ -0.27
SDF4-207ENST00000494748 NDUFA6P56556 154 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 IL13RA2Q14627 380 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 TMEM176BQ3YBM2 270 aaPredicted RBP13.39□□□□□ -0.27
SDF4-207ENST00000494748 SUMF2Q8NBJ7 301 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 SLC38A9Q8NBW4 561 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 KCNIP3Q9Y2W7 256 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 CEP290O15078 2479 aa13.39□□□□□ -0.27
SDF4-207ENST00000494748 VEGFBP49765 207 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 RNF4P78317 190 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
SDF4-207ENST00000494748 Q6ZPA2 131 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 ODF3L1Q8IXM7 274 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 OR1L3Q8NH93 324 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 HAS2Q92819 552 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 RHOVQ96L33 236 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 JSRP1Q96MG2 331 aaPredicted RBP13.38□□□□□ -0.27
SDF4-207ENST00000494748 GAR1Q9NY12 217 aaKnown RBP13.38□□□□□ -0.27
SDF4-207ENST00000494748 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 RBFOX3A6NFN3 312 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 TMEM225BP0DP42 221 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 FAHP16930 419 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 UNQ6494/PRO21346Q6UXR6 183 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 LIAT1Q6ZQX7 453 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 TMED3Q9Y3Q3 217 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 IGHV3-20A0A0C4DH32 117 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 H0YL77 283 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 IGHG1P01857 330 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 FCGR2AP12318 317 aa13.38□□□□□ -0.27
SDF4-207ENST00000494748 HIST1H1BP16401 226 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms