RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 ADRA2CP18825 462 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 PTGFRP43088 359 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 ZP1P60852 638 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 SMIM21Q3B7S5 101 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 CRIP3Q6Q6R5 217 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 Q8IYB0 196 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 SAXO1Q8IYX7 474 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 SPICQ8N5J4 248 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 ZSCAN4Q8NAM6 433 aaPredicted RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 NRIP2Q9BQI9 281 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 CENPOQ9BU64 300 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 REG4Q9BYZ8 158 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 RASL12Q9NYN1 266 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 MTCH1Q9NZJ7 389 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 PCDHB10Q9UN67 800 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 ING4Q9UNL4 249 aa12.22□□□□□ -0.45
BRCA1-223ENST00000494123 AK6Q9Y3D8 172 aaKnown RBP12.22□□□□□ -0.45
BRCA1-223ENST00000494123 ACAA1P09110 424 aaPredicted RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 MUC1P15941 1255 aaPredicted RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 BCL3P20749 454 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 USF1P22415 310 aaPredicted RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 PSMD7P51665 324 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 LSM3P62310 102 aaKnown RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 RSU1Q15404 277 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 ZNF404Q494X3 552 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 TMEM155Q4W5P6 130 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 GPR107Q5VW38 600 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 FIP1L1Q6UN15 594 aaKnown RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 LRRC28Q86X40 367 aaPredicted RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 EMG1Q92979 244 aaKnown RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 UQCC2Q9BRT2 126 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 CNTD2Q9H8S5 307 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 PLGRKTQ9HBL7 147 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 TMEM165Q9HC07 324 aa12.21□□□□□ -0.46
BRCA1-223ENST00000494123 MRPS28Q9Y2Q9 187 aaKnown RBP12.21□□□□□ -0.46
BRCA1-223ENST00000494123 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.2□□□□□ -0.46
BRCA1-223ENST00000494123 FSTL3O95633 263 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 HEXAP06865 529 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 RAB3BP20337 219 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 NPBWR2P48146 333 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 MTNR1BP49286 362 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 TEX36Q5VZQ5 186 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 AWAT2Q6E213 333 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 ACP7Q6ZNF0 438 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 FAM90A1Q86YD7 464 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 PXT1Q8NFP0 134 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 C12orf43Q96C57 262 aaKnown RBP12.2□□□□□ -0.46
BRCA1-223ENST00000494123 SEH1LQ96EE3 360 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 METTL9Q9H1A3 318 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 RNF167Q9H6Y7 350 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 RBFOX1Q9NWB1 397 aaKnown RBP12.2□□□□□ -0.46
BRCA1-223ENST00000494123 NLKQ9UBE8 527 aa12.2□□□□□ -0.46
BRCA1-223ENST00000494123 IGHV4-61A0A0C4DH41 118 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 IGKV1-12A0A0C4DH73 117 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 SHISA3A0PJX4 238 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 KDM4BO94953 1096 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 CDRT1O95170 752 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 IGKV1D-12P01611 117 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 GYPAP02724 150 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 PRKACAP17612 351 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 ERVK11-1P61568 191 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 GLIPR1L1Q6UWM5 242 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 DCDC5Q6ZRR9 648 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 C1QL2Q7Z5L3 287 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 TPRA1Q86W33 373 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 FAM58AQ8N1B3 248 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 OR5T2Q8NGG2 359 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 CLDND2Q8NHS1 167 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 RHOFQ9HBH0 211 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 PCDHB16Q9NRJ7 776 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 V9GY05 133 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 ITPR3Q14573 2671 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 OR2AT4A6NND4 320 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 F8VVB4 439 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 F8VWA3 439 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 NDUFA2O43678 99 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 ZNF780AO75290 641 aaPredicted RBP12.19□□□□□ -0.46
BRCA1-223ENST00000494123 HTR3BO95264 441 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 CSTBP04080 98 aaKnown RBP12.19□□□□□ -0.46
BRCA1-223ENST00000494123 SFTPBP07988 381 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
BRCA1-223ENST00000494123 HTR2CP28335 458 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 MXD1Q05195 221 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 ANKRD13BQ86YJ7 626 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 OR4D6Q8NGJ1 314 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 OR6M1Q8NGM8 313 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 OR10K1Q8NGX5 313 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 RAB39BQ96DA2 213 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 GFI1Q99684 422 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 HES4Q9HCC6 221 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 MIOXQ9UGB7 285 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 OR14J1Q9UGF5 321 aa12.19□□□□□ -0.46
BRCA1-223ENST00000494123 SMIM30A4D0T7 59 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 NKX6-3A6NJ46 265 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 CEACAM18A8MTB9 384 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 H7C1Q1 480 aa12.18□□□□□ -0.46
BRCA1-223ENST00000494123 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
BRCA1-223ENST00000494123 CALCBP10092 127 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms