RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 DGAT2L6Q6ZPD8 337 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 PHYHIPLQ96FC7 376 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 PIK3IP1Q96FE7 263 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 AMDHD2Q9Y303 409 aa17.03■□□□□ 0.32
COL27A1-207ENST00000494090 FGF2P09038 288 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 CTLA4P16410 223 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF32P17041 273 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 PRRX1P54821 245 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 ALKBH6Q3KRA9 238 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 RAB40CQ96S21 281 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 NCBP2LA6PVI3 153 aaKnown RBP17.02■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF785A8K8V0 405 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 DUS4LO95620 317 aaKnown RBP17.02■□□□□ 0.32
COL27A1-207ENST00000494090 CPN1P15169 458 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 GALNSP34059 522 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 GZMMP51124 257 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 SP6Q3SY56 376 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 ACY3Q96HD9 319 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 MPC1Q9Y5U8 109 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 HYAL3O43820 417 aaPredicted RBP17.02■□□□□ 0.32
COL27A1-207ENST00000494090 CST7O76096 145 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 GUK1Q16774 197 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 RAB1BQ9H0U4 201 aa17.02■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF230Q9UIE0 474 aaPredicted RBP17.02■□□□□ 0.32
COL27A1-207ENST00000494090 ZNF574Q6ZN55 896 aaPredicted RBP17.02■□□□□ 0.31
COL27A1-207ENST00000494090 SIGLECL1Q8N7X8 197 aa17.02■□□□□ 0.31
COL27A1-207ENST00000494090 CNTD2Q9H8S5 307 aa17.02■□□□□ 0.31
COL27A1-207ENST00000494090 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.02■□□□□ 0.31
COL27A1-207ENST00000494090 PJVKQ0ZLH3 352 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 LSMEM1Q8N8F7 131 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 SF3B5Q9BWJ5 86 aaKnown RBP17.01■□□□□ 0.31
COL27A1-207ENST00000494090 THYN1Q9P016 225 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 A0A1W2PQD3 144 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 LHX9Q9NQ69 397 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 UQCC1Q9NVA1 299 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 FLRT3Q9NZU0 649 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 MPC2O95563 127 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 TNFAIP6P98066 277 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-207ENST00000494090 HES3Q5TGS1 186 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 WDR74Q6RFH5 385 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-207ENST00000494090 LRRTM1Q86UE6 522 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 RAB1CQ92928 201 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 SLC26A1Q9H2B4 701 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 GOLT1BQ9Y3E0 138 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 TMIGD3P0DMS9 266 aaPredicted RBP17.01■□□□□ 0.31
COL27A1-207ENST00000494090 RAC3P60763 192 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 MIDNQ504T8 468 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 OR2Y1Q8NGV0 311 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 GRAMD2BQ96HH9 432 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 FAM60AQ9NP50 221 aa17.01■□□□□ 0.31
COL27A1-207ENST00000494090 SLC31A2O15432 143 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 CD82P27701 267 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 PMP22Q01453 160 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 C10orf111Q8N326 155 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 OR6X1Q8NH79 312 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 MBD1Q9UIS9 605 aaPredicted RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 H3BP45 60 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 MASP2O00187 686 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 PDCD6O75340 191 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 GOSR1O95249 250 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 BMP5P22003 454 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 OR3A4PP47883 348 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 FAHD2BQ6P2I3 314 aaPredicted RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 FAHD2AQ96GK7 314 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 WDR61Q9GZS3 305 aaKnown RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 CXXC4Q9H2H0 198 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 MIXL1Q9H2W2 232 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 C21orf140B9A014 251 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 ZNF17P17021 662 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 CA6P23280 308 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 LIMK1P53667 647 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 ZNF774Q6NX45 483 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 ADTRPQ96IZ2 230 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 TMEM147Q9BVK8 224 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 PWWP2BQ6NUJ5 590 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 ATG4DQ86TL0 474 aaPredicted RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 OR4F17Q8NGA8 305 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 TM4SF19Q96DZ7 209 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 VSTM2LQ96N03 204 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 C12orf57Q99622 126 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 OR6C3Q9NZP0 311 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 A0A1W2PN81 502 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 PPIHO43447 177 aaKnown RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 HNF1AP20823 631 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 S100A4P26447 101 aaKnown RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 CHRNA7P36544 502 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 CEACAM6P40199 344 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 PPP1CBP62140 327 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 PRSS54Q6PEW0 395 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 MRGPREQ86SM8 312 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 TRMT61AQ96FX7 289 aaKnown RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 FAAP24Q9BTP7 215 aa17■□□□□ 0.31
COL27A1-207ENST00000494090 LSM2Q9Y333 95 aaKnown RBP17■□□□□ 0.31
COL27A1-207ENST00000494090 COL24A1Q17RW2 1714 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 FABP9Q0Z7S8 132 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 RAB32Q13637 225 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 TMEM18Q96B42 140 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 NTF3P20783 257 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 PSG6Q00889 435 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 EIF4EBP2Q13542 120 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms