RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 NHSQ6T4R5 1651 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 MGAT4DA6NG13 374 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 MED6O75586 246 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 VAMP5O95183 116 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 IGHV3-11P01762 117 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 ZNF688P0C7X2 276 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 CD9P21926 228 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 PRKACBP22694 351 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 GALR1P47211 349 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 MAD2L1BPQ15013 274 aaPredicted RBP3.85□□□□□ -1.79
SMC2-205ENST00000493955 TNXAQ16473 311 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 PSG3Q16557 428 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 C6orf99Q4VX62 202 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 SLC7A5P1Q8MH63 180 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 LGI3Q8N145 548 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 OR1S1Q8NH92 325 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 DCAKDQ8WVC6 231 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 C1orf198Q9H425 327 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 ZNF430Q9H8G1 570 aaPredicted RBP3.85□□□□□ -1.79
SMC2-205ENST00000493955 HEBP1Q9NRV9 189 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 TMEM100Q9NV29 134 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 KLK12Q9UKR0 248 aa3.85□□□□□ -1.79
SMC2-205ENST00000493955 BTAF1O14981 1849 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 SHANK3Q9BYB0 1731 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 OR5H1A6NKK0 313 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 HSBP1L1C9JCN9 74 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 RBFOX2O43251 390 aaKnown RBP eCLIP3.84□□□□□ -1.79
SMC2-205ENST00000493955 ZNF207O43670 478 aaKnown RBP3.84□□□□□ -1.79
SMC2-205ENST00000493955 EIF1BO60739 113 aaKnown RBP3.84□□□□□ -1.79
SMC2-205ENST00000493955 ZMPSTE24O75844 475 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 HLA-DQA1P01909 254 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 MT-ND4P03905 459 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 EIF1P41567 113 aaKnown RBP3.84□□□□□ -1.79
SMC2-205ENST00000493955 ERFP50548 548 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 MTPNP58546 118 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 LRRC63Q05C16 580 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 Q5W150 140 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 KDM4DQ6B0I6 523 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 FAHD1Q6P587 224 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 DEGS2Q6QHC5 323 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 COPS6Q7L5N1 327 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 ZNF645Q8N7E2 425 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 CYB561A3Q8NBI2 242 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 SYNPRQ8TBG9 265 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 ENKURQ8TC29 256 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 NEURL3Q96EH8 262 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 SMARCD1Q96GM5 515 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 ZBED3Q96IU2 234 aaPredicted RBP3.84□□□□□ -1.79
SMC2-205ENST00000493955 CPB2Q96IY4 423 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 Q96MT0 163 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 OR4K3Q96R72 315 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 C20orf144Q9BQM9 153 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 FRMD8P1Q9BZ68 369 aaPredicted RBP3.84□□□□□ -1.79
SMC2-205ENST00000493955 C8orf17Q9NRJ1 99 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 RMND1Q9NWS8 449 aa3.84□□□□□ -1.79
SMC2-205ENST00000493955 YTHDF2Q9Y5A9 579 aaKnown RBP3.84□□□□□ -1.79
SMC2-205ENST00000493955 SLIT3O75094 1523 aa3.84□□□□□ -1.8
SMC2-205ENST00000493955 MYO10Q9HD67 2058 aa3.84□□□□□ -1.8
SMC2-205ENST00000493955 LTN1O94822 1766 aa3.84□□□□□ -1.8
SMC2-205ENST00000493955 RGPD2P0DJD1 1756 aa3.84□□□□□ -1.8
SMC2-205ENST00000493955 DHX57Q6P158 1386 aaKnown RBP3.83□□□□□ -1.8
SMC2-205ENST00000493955 IGSF9BQ9UPX0 1349 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 IGKV6D-21A0A0A0MT36 114 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 FAM240AA0A1B0GVK7 77 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 C5orf63A6NC05 138 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 MANBAO00462 879 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 ZNF593O00488 134 aaPredicted RBP3.83□□□□□ -1.8
SMC2-205ENST00000493955 ADRA2AP08913 450 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 C1GALT1C1LP0DN25 315 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 LIPCP11150 499 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 DNASE1L1P49184 302 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 RGS6P49758 472 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 PTGES3Q15185 160 aaKnown RBP3.83□□□□□ -1.8
SMC2-205ENST00000493955 SYCE1Q8N0S2 351 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 TMEM256Q8N2U0 113 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 DRAM1Q8N682 238 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 OTUD6BQ8N6M0 293 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 UBALD1Q8TB05 177 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 TMEM159Q96B96 161 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 RBMXL1Q96E39 390 aaKnown RBP3.83□□□□□ -1.8
SMC2-205ENST00000493955 ATP6V1G3Q96LB4 118 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 ZNF285Q96NJ3 590 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 SDHCQ99643 169 aaPredicted RBP3.83□□□□□ -1.8
SMC2-205ENST00000493955 SDHAF2Q9NX18 166 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 RAB23Q9ULC3 237 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 QSER1Q2KHR3 1735 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 MON2Q7Z3U7 1717 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 DOT1LQ8TEK3 1739 aa3.83□□□□□ -1.8
SMC2-205ENST00000493955 USP54Q70EL1 1684 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 IGHV3-72A0A0B4J1Y9 119 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 A0A1B0GW15 77 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 M0R1B8 84 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 M0R1X1 148 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 MMP7P09237 267 aaPredicted RBP3.82□□□□□ -1.8
SMC2-205ENST00000493955 CISD3P0C7P0 127 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 HSPD1P10809 573 aaKnown RBP3.82□□□□□ -1.8
SMC2-205ENST00000493955 KCNJ3P48549 501 aa3.82□□□□□ -1.8
SMC2-205ENST00000493955 USF2Q15853 346 aaPredicted RBP3.82□□□□□ -1.8
SMC2-205ENST00000493955 RNASE13Q5GAN3 156 aaKnown RBP3.82□□□□□ -1.8
SMC2-205ENST00000493955 ZNF684Q5T5D7 378 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms