RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DMRTC1Q5HYR2 192 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 SPIN3Q5JUX0 258 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 C1orf100Q5SVJ3 147 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 SFXN4Q6P4A7 337 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 SLC16A12Q6ZSM3 486 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 LINC00596Q86U02 117 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 ANGPTL5Q86XS5 388 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 CALHM1Q8IU99 346 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 KCNG3Q8TAE7 436 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 SLAMF9Q96A28 289 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 KCTD12Q96CX2 325 aaKnown RBP12.58□□□□□ -0.4
ACTB-213ENST00000493945 FOXC2Q99958 501 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 DCSTAMPQ9H295 470 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.4
ACTB-213ENST00000493945 PPP1R3EQ9H7J1 279 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 CNTD2Q9H8S5 307 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 CELSR2Q9HCU4 2923 aa12.58□□□□□ -0.4
ACTB-213ENST00000493945 LRBAP50851 2863 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 IGKV1-27A0A075B6S5 117 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 OOEPA6NGQ2 149 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 LGALS8O00214 317 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 AKR7A2O43488 359 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 SPRY1O43609 319 aaPredicted RBP12.57□□□□□ -0.4
ACTB-213ENST00000493945 OR3A4PP47883 348 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 RORCP51449 518 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 NCS1P62166 190 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 CLEC12BQ2HXU8 276 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 Q5PR19 223 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 GLIPR1L1Q6UWM5 242 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 NLRC3Q7RTR2 1065 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 OR2W3Q7Z3T1 314 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 FAM58AQ8N1B3 248 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 ZNF525Q8N782 197 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 BOLLQ8N9W6 283 aaKnown RBP12.57□□□□□ -0.4
ACTB-213ENST00000493945 POM121Q96HA1 1249 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 NRIP2Q9BQI9 281 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 URM1Q9BTM9 101 aaKnown RBP12.57□□□□□ -0.4
ACTB-213ENST00000493945 FGF23Q9GZV9 251 aaPredicted RBP12.57□□□□□ -0.4
ACTB-213ENST00000493945 PCDHB10Q9UN67 800 aa12.57□□□□□ -0.4
ACTB-213ENST00000493945 SYNGR1O43759 233 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 RP2O75695 350 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 SCGNO76038 276 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 HTR3BO95264 441 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 CYB5R3P00387 301 aaPredicted RBP12.56□□□□□ -0.4
ACTB-213ENST00000493945 KNG1P01042 644 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 ADRA2CP18825 462 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 SERPINA2P20848 420 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 GIFP27352 417 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 TMEM155Q4W5P6 130 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 ELP2Q6IA86 826 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 MZT2AQ6P582 158 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 ZNF826PQ6ZT77 177 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 SLC36A1Q7Z2H8 476 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 GCSAMQ8N6F7 178 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 PPP1R35Q8TAP8 253 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 ACOT12Q8WYK0 555 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 YIPF5Q969M3 257 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 SLC25A46Q96AG3 418 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 PHF21AQ96BD5 680 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 RAB39BQ96DA2 213 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 DGCR14Q96DF8 476 aaKnown RBP12.56□□□□□ -0.4
ACTB-213ENST00000493945 GAL3ST1Q99999 423 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 TMEM59Q9BXS4 323 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 DNTTIP1Q9H147 329 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 ABRACLQ9P1F3 81 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 NLKQ9UBE8 527 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 DAPK2Q9UIK4 370 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 ETV7Q9Y603 341 aa12.56□□□□□ -0.4
ACTB-213ENST00000493945 H3BMQ9 156 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 ANGPTL7O43827 346 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 NDUFS7O75251 213 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 CRTAPO75718 401 aaPredicted RBP12.55□□□□□ -0.4
ACTB-213ENST00000493945 RHBDL1O75783 438 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 LHBP01229 141 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 CALCBP10092 127 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 PRKACAP17612 351 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 COL8A2P25067 703 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 FGF12P61328 243 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 HNRNPA0Q13151 305 aaKnown RBP12.55□□□□□ -0.4
ACTB-213ENST00000493945 DYNC1I2Q13409 638 aaKnown RBP12.55□□□□□ -0.4
ACTB-213ENST00000493945 IL13RA2Q14627 380 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 IDNKQ5T6J7 187 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 HES5Q5TA89 166 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 TEX36Q5VZQ5 186 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 ASCL4Q6XD76 172 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 ACP7Q6ZNF0 438 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 DCDC5Q6ZRR9 648 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 C11orf53Q8IXP5 236 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 OSR2Q8N2R0 312 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 FAM3DQ96BQ1 224 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 NAA50Q9GZZ1 169 aaKnown RBP12.55□□□□□ -0.4
ACTB-213ENST00000493945 LIN7BQ9HAP6 207 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 SPACA1Q9HBV2 294 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 TREM2Q9NZC2 230 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 WIPI2Q9Y4P8 454 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
ACTB-213ENST00000493945 APCP25054 2843 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 METTL21EPA6NDL7 271 aa12.54□□□□□ -0.4
ACTB-213ENST00000493945 FAM90A10PA6NDY2 464 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms