RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	MED20	Q9H944	212 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	TMEM45A	Q9NWC5	275 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	KPTN	Q9Y664	436 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	HS3ST1	O14792	307 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	TF	P02787	698 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	CD37	P11049	281 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	EPHA2	P29317	976 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	SSR4	P51571	173 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	UFM1	P61960	85 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	PPIA	P62937	165 aa	Known RBP	10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	IGFL3	Q6UXB1	125 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	B3GLCT	Q6Y288	498 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	PRICKLE2	Q7Z3G6	844 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	C6orf120	Q7Z4R8	191 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	RIMKLA	Q8IXN7	391 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF615	Q8N8J6	731 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR2AK2	Q8NG84	335 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	RASL10B	Q96S79	203 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	C20orf144	Q9BQM9	153 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	SELENOI	Q9C0D9	397 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	OBP2B	Q9NPH6	170 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	MMP26	Q9NRE1	261 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	RASD1	Q9Y272	281 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	YARS2	Q9Y2Z4	477 aa	Known RBP	10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	TIMM10B	Q9Y5J6	103 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	COL6A6	A6NMZ7	2263 aa		10.19	□□□□□ -0.78
BRCA1-222	ENST00000493919	TCRBV5S2	A0A599	114 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	AQP7P3	A6NL99	342 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	SULT2B1	O00204	365 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF208	O43345	1280 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR2A4	O95047	310 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	MBP	P02686	304 aa	Predicted RBP	10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	PPIAL4G	P0DN37	164 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR13C7	P0DN81	318 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	AKR1C4	P17516	323 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	MPG	P29372	298 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	SOAT1	P35610	550 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	SOX18	P35713	384 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	SOX3	P41225	446 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	KIR3DL1	P43629	444 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	RFX3	P48380	749 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	CTBP2	P56545	445 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	FABP5	Q01469	135 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	RHEB	Q15382	184 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR1C1	Q15619	314 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	FAM174B	Q3ZCQ3	159 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	RAET1L	Q5VY80	246 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF770	Q6IQ21	691 aa	Predicted RBP	10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	HEPN1	Q6WQI6	88 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR2W3	Q7Z3T1	314 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF843	Q8N446	348 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	SLC35G3	Q8N808	338 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR1J4	Q8NGS1	313 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	MCHR2	Q969V1	340 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	SIGLEC12	Q96PQ1	595 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR2A7	Q96R45	310 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	HIST1H2BL	Q99880	126 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	FAM96B	Q9Y3D0	163 aa		10.18	□□□□□ -0.78
BRCA1-222	ENST00000493919	ANKUB1	A6NFN9	424 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	EIF4E2	O60573	245 aa	Known RBP	10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	C1QL1	O75973	258 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	SOD3	P08294	240 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	GPX3	P22352	226 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	PAX5	Q02548	391 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	SPANXN4	Q5MJ08	99 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	SPINK14	Q6IE38	97 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	FAAP20	Q6NZ36	180 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	TMEM64	Q6YI46	380 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	PRR22	Q8IZ63	422 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR4K5	Q8NGD3	323 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	PNPLA2	Q96AD5	504 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	HES7	Q9BYE0	225 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	SLC25A31	Q9H0C2	315 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	COX11	Q9Y6N1	276 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	TRAV17	A0A0B4J275	112 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	TMEM213	A2RRL7	107 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	NKX2-6	A6NCS4	301 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	FGF16	O43320	207 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	OR7C2	O60412	319 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	ZNF354A	O60765	605 aa	Predicted RBP	10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	SLC25A12	O75746	678 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	ADRA2A	P08913	450 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	AREG	P15514	252 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	GPX2	P18283	190 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	PSMA1	P25786	263 aa	Known RBP	10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	FRK	P42685	505 aa	Predicted RBP	10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	EMD	P50402	254 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	WNT3	P56703	355 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	RIPPLY3	P57055	190 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	BAX	Q07812	192 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	GSG1	Q2KHT4	349 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	TMEM201	Q5SNT2	666 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	TMEM225	Q6GV28	225 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919		Q6ZS92	163 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	ACOT7L	Q6ZUV0	252 aa		10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	WDR53	Q7Z5U6	358 aa	Predicted RBP	10.17	□□□□□ -0.78
BRCA1-222	ENST00000493919	CLECL1	Q8IZS7	167 aa		10.17	□□□□□ -0.78

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