RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ZMAT3Q9HA38 289 aaKnown RBP18.66■□□□□ 0.58
SNIP1-203ENST00000493916 MAB21L2Q9Y586 359 aa18.66■□□□□ 0.58
SNIP1-203ENST00000493916 RFPL4AA6NLU0 287 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 RFPL4AL1F8VTS6 287 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 LIMS3P0CW19 117 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 LIMS4P0CW20 117 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 ZNF20P17024 532 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 BRD3OSQ6XYD6 125 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 CD177Q8N6Q3 437 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 ZNF676Q8N7Q3 588 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 ZNRF1Q8ND25 227 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 CNIH3Q8TBE1 160 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 H1FXQ92522 213 aaKnown RBP18.65■□□□□ 0.58
SNIP1-203ENST00000493916 FGGYQ96C11 551 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 BORCS8Q96FH0 119 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 ONECUT1Q9UBC0 465 aa18.65■□□□□ 0.58
SNIP1-203ENST00000493916 IGKV1-9A0A0C4DH69 117 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 CENPVL3A0A0U1RRI6 287 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 IRGMA1A4Y4 181 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 DNAJC9-AS1A6NH13 148 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 TMEM212A6NML5 194 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 CCDC159P0C7I6 412 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 NDUFB7P17568 137 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 DCKP27707 260 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 CMTM4Q8IZR5 234 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 ZNF561Q8N587 486 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 TMEM185AQ8NFB2 350 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 OR51A4Q8NGJ6 313 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 OR13C3Q8NGS6 347 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 OR10AC1Q8NH08 325 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 SPSB1Q96BD6 273 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 C1orf147Q96MC9 270 aaPredicted RBP18.64■□□□□ 0.57
SNIP1-203ENST00000493916 PRDM13Q9H4Q3 707 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 SOX21Q9Y651 276 aaPredicted RBP18.64■□□□□ 0.57
SNIP1-203ENST00000493916 HSPE1-MOB4S4R3N1 261 aa18.64■□□□□ 0.57
SNIP1-203ENST00000493916 TRBV23-1A0A0A0MS06 115 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 E9PI62 339 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 CLDN34H7C241 214 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 KNG1P01042 644 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 ATF1P18846 271 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 PRKACBP22694 351 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 PRDX2P32119 198 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 RBP2P50120 134 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 GBX2P52951 348 aaPredicted RBP18.63■□□□□ 0.57
SNIP1-203ENST00000493916 GABPB1Q06547 395 aaPredicted RBP18.63■□□□□ 0.57
SNIP1-203ENST00000493916 BAMBIQ13145 260 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 VMO1Q7Z5L0 202 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 GATAD2BQ8WXI9 593 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 LHX4Q969G2 390 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 CEP19Q96LK0 163 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 MTCH1Q9NZJ7 389 aa18.63■□□□□ 0.57
SNIP1-203ENST00000493916 IGHV1-69DA0A0B4J2H0 117 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 H0YAE9 185 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 SLC1A7O00341 560 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 ZFPL1O95159 310 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 IGHV1-69P01742 117 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 MT-ND2P03891 347 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 PRTN3P24158 256 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 AZGP1P25311 298 aaKnown RBP18.62■□□□□ 0.57
SNIP1-203ENST00000493916 CAPGP40121 348 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 ATP1B3P54709 279 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 ACTG1P63261 375 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 RUSC1-AS1Q66K80 236 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 METAP1DQ6UB28 335 aaPredicted RBP18.62■□□□□ 0.57
SNIP1-203ENST00000493916 LHFPL2Q6ZUX7 228 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 SLC25A26Q70HW3 274 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 COMMD4Q9H0A8 199 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 DCLRE1BQ9H816 532 aa18.62■□□□□ 0.57
SNIP1-203ENST00000493916 DIMT1Q9UNQ2 313 aaKnown RBP18.62■□□□□ 0.57
SNIP1-203ENST00000493916 CAB39Q9Y376 341 aaPredicted RBP18.62■□□□□ 0.57
SNIP1-203ENST00000493916 M0R1W7 72 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 ETV1P50549 477 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 DEFB112Q30KQ8 113 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 C1orf122Q6ZSJ8 110 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 Q8IYB0 196 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 BATF2Q8N1L9 274 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 Q8N7P7 452 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 OR5AK2Q8NH90 309 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 SLAMF9Q96A28 289 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 OPALINQ96PE5 141 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 VCXQ9H320 206 aa18.61■□□□□ 0.57
SNIP1-203ENST00000493916 ELL3Q9HB65 397 aaPredicted RBP18.61■□□□□ 0.57
SNIP1-203ENST00000493916 MDFIC2A0A1B0GVS7 189 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 A0A1W2PQ09 198 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 TMEM89A2RUT3 159 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 RNASE1P07998 156 aaKnown RBP18.6■□□□□ 0.57
SNIP1-203ENST00000493916 CEBPDP49716 269 aaPredicted RBP18.6■□□□□ 0.57
SNIP1-203ENST00000493916 COMPP49747 757 aaPredicted RBP18.6■□□□□ 0.57
SNIP1-203ENST00000493916 CAPZA1P52907 286 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 MTCP1P56278 107 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 CCDC58Q4VC31 144 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 TMPRSS11AQ6ZMR5 421 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 MKXQ8IYA7 352 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 C8orf59Q8N0T1 100 aaPredicted RBP18.6■□□□□ 0.57
SNIP1-203ENST00000493916 RPS4Y2Q8TD47 263 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 PDCD1LG2Q9BQ51 273 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 FAM234AQ9H0X4 552 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 UNKLQ9H9P5 680 aaKnown RBP18.6■□□□□ 0.57
SNIP1-203ENST00000493916 NOX4Q9NPH5 578 aa18.6■□□□□ 0.57
SNIP1-203ENST00000493916 EXOSC1Q9Y3B2 195 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms