RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 IGHV2-5P01817 119 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 INHBBP09529 407 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4L2P0CJ85 424 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4L3P0CJ86 424 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4L4P0CJ87 422 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4L5P0CJ88 424 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4L6P0CJ89 424 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4L7P0CJ90 424 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 TMEM225BP0DP42 221 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 CD36P16671 472 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 SRMP19623 302 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 BCL3P20749 454 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 ZNF93P35789 620 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 SEC61A1P61619 476 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 TMEM249Q2WGJ8 235 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 TMEM155Q4W5P6 130 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 TEX36Q5VZQ5 186 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 CD200R1LQ6Q8B3 271 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4L9Q6RFH8 374 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 LRRTM1Q86UE6 522 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 MUC20Q8N307 709 aaPredicted RBP14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 SPICQ8N5J4 248 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 JAGN1Q8N5M9 183 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 TMIGD2Q96BF3 282 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 CEP19Q96LK0 163 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 OR51E2Q9H255 320 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 LPAR2Q9HBW0 351 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 EXOSC4Q9NPD3 245 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 RBFOX1Q9NWB1 397 aaKnown RBP14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 DUX4Q9UBX2 424 aa14.94□□□□□ -0.02
PDLIM7-208ENST00000493815 FAM157AC9JC47 383 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 ALDOBP05062 364 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 C22orf42Q6IC83 251 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 ACP7Q6ZNF0 438 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 TNFAIP8L1Q8WVP5 186 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 IL36RNQ9UBH0 155 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 F8P00451 2351 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 TRDV1A0A1B0GX56 115 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 NOS1APO75052 506 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 CDRT1O95170 752 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 MUC1P15941 1255 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 JUNBP17275 347 aaPredicted RBP14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 GADD45AP24522 165 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 ERVK11-1P61568 191 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 MKXQ8IYA7 352 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 CCL13Q99616 98 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 PATZ1Q9HBE1 687 aaKnown RBP14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 SMURF1Q9HCE7 757 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 NLKQ9UBE8 527 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 STUB1Q9UNE7 303 aa14.93□□□□□ -0.02
PDLIM7-208ENST00000493815 CSPG4Q6UVK1 2322 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 SHISA3A0PJX4 238 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 OR2AT4A6NND4 320 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 TRAPPC2LH3BP13 241 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 CYB5AP00167 134 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 SFTPBP07988 381 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 IGHV4-31P0DP07 118 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 RPS2P15880 293 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 AMY2BP19961 511 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 PTGFRP43088 359 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 CEBPDP49716 269 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 SNU13P55769 128 aaKnown RBP14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 DCDC5Q6ZRR9 648 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 OR10K1Q8NGX5 313 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 CHCHD6Q9BRQ6 235 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 CNTD2Q9H8S5 307 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 ELL3Q9HB65 397 aaPredicted RBP14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 HES4Q9HCC6 221 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 CTSZQ9UBR2 303 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 SVEP1Q4LDE5 3571 aa14.92□□□□□ -0.02
PDLIM7-208ENST00000493815 IGKV1D-17A0A075B6S4 117 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 LOC100506127A0A0U1RQW1 187 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 RFPL4AA6NLU0 287 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 RFPL4AL1F8VTS6 287 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 TNFRSF13BO14836 293 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 TMPRSS2O15393 492 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 PHF1O43189 567 aaPredicted RBP14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 ADAM20O43506 726 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 ARL6IP5O75915 188 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 FSTL3O95633 263 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 WNT2P09544 360 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 PSG2P11465 335 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 SMIM21Q3B7S5 101 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 STUMQ69YW2 141 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 FAM216BQ8N7L0 139 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 PHYHIPQ92561 330 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 GFI1Q99684 422 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 MRPS26Q9BYN8 205 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 RNF167Q9H6Y7 350 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 TXNL4BQ9NX01 149 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 OR14J1Q9UGF5 321 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 ING4Q9UNL4 249 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 AK6Q9Y3D8 172 aaKnown RBP14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 ABCA2Q9BZC7 2435 aa14.91□□□□□ -0.02
PDLIM7-208ENST00000493815 ACAA1P09110 424 aaPredicted RBP14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 SELLP14151 372 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 DUSP1P28562 367 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 GABRA2P47869 451 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 KRTAP1-1Q07627 177 aa14.9□□□□□ -0.02
PDLIM7-208ENST00000493815 KCNJ8Q15842 424 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms