RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 RIPPLY1Q0D2K3 151 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 IKZF1Q13422 519 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 RNASE10Q5GAN6 216 aaKnown RBP6.12□□□□□ -1.43
HERC4-211ENST00000492996 SPINK14Q6IE38 97 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 LYPD6Q86Y78 171 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 PXT1Q8NFP0 134 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 FOXRED1Q96CU9 486 aaPredicted RBP6.12□□□□□ -1.43
HERC4-211ENST00000492996 RSRP1Q9BUV0 290 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 P4HTMQ9NXG6 502 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 RHBDD3Q9Y3P4 386 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 NPTNQ9Y639 398 aa6.12□□□□□ -1.43
HERC4-211ENST00000492996 A0A087WZY1 265 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 SNRPGP15A8MWD9 76 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CCSO14618 274 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CRYABP02511 175 aaKnown RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 OR4E1P0C645 316 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CXCL2P19875 107 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 NFYAP23511 347 aaPredicted RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 S100A2P29034 98 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 RBP2P50120 134 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CSNK2A1P68400 391 aaPredicted RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 ENDOGQ14249 297 aaKnown RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 HIST3H3Q16695 136 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 ZNF260Q3ZCT1 412 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 LRRC37A5PQ49AS3 106 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 RIPPLY2Q5TAB7 128 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 C1QL2Q7Z5L3 287 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 FOXRED2Q8IWF2 684 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 BEST3Q8N1M1 668 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 ZIC4Q8N9L1 334 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 OR2AE1Q8NHA4 323 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 PIGTQ969N2 578 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 NAA11Q9BSU3 229 aaPredicted RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 ZDHHC11Q9H8X9 412 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 DEPPQ9NTK1 212 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 SVILO95425 2214 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 RIF1Q5UIP0 2472 aaKnown RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 IGKV1-9A0A0C4DH69 117 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 F12P00748 615 aaPredicted RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 PMP2P02689 132 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CPN1P15169 458 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 GDF1P27539 372 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 HRH1P35367 487 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CARD18P57730 90 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 RAP2BP61225 183 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 RAC1P63000 192 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 SRYQ05066 204 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 GUCA2BQ16661 112 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 ATPAF1Q5TC12 328 aaPredicted RBP6.11□□□□□ -1.43
HERC4-211ENST00000492996 SEZ6L2Q6UXD5 910 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CLEC9AQ6UXN8 241 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 SPICQ8N5J4 248 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 TMEM229BQ8NBD8 167 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 GJC3Q8NFK1 279 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 CASTOR1Q8WTX7 329 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 MAFIPQ8WZ33 124 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 NELFAQ9H3P2 528 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 SHANK1Q9Y566 2161 aa6.11□□□□□ -1.43
HERC4-211ENST00000492996 A0A087X0M5 115 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 A0A1B0GX30 115 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 PINLYPA6NC86 204 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 BPNT1O95861 308 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 GIPP09681 153 aaPredicted RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 B4GALT1P15291 398 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 SUCLG1P53597 346 aaKnown RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 PEA15Q15121 130 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 C9orf135Q5VTT2 229 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 RAB12Q6IQ22 244 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 OR13C8Q8NGS7 320 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 MISP3Q96FF7 219 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 ZNF845Q96IR2 970 aaPredicted RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 SEC22AQ96IW7 307 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 THOC3Q96J01 351 aaKnown RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 LYZL4Q96KX0 146 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 SGCZQ96LD1 299 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 FOXC2Q99958 501 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 UTP23Q9BRU9 249 aaKnown RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 GGACTQ9BVM4 153 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 HES7Q9BYE0 225 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 OPA3Q9H6K4 179 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 OPN4Q9UHM6 478 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 ZNF230Q9UIE0 474 aaPredicted RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 NOP16Q9Y3C1 178 aaKnown RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 SPTBN2O15020 2390 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 A0A0A6YYD4 124 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 F5H5P2 479 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 M0R135 149 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 NME2P1O60361 137 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 IFNA6P05013 189 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 ERCC1P07992 297 aaPredicted RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 ZNF735P0CB33 412 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 AKR1C4P17516 323 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 SERPINA2P20848 420 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 NME2P22392 152 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 FKBP2P26885 142 aaKnown RBP6.1□□□□□ -1.43
HERC4-211ENST00000492996 DLSTP36957 453 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 CD96P40200 585 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 QRFPP83859 136 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 ARFRP1Q13795 201 aa6.1□□□□□ -1.43
HERC4-211ENST00000492996 ATXN7L3Q14CW9 347 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms