RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 CWH43Q9H720 699 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF696Q9H7X3 374 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 RNF121Q9H920 327 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 NHEJ1Q9H9Q4 299 aaPredicted RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 NANOGQ9H9S0 305 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 POPDC3Q9HBV1 291 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 CISHQ9NSE2 258 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 PLEKHB1Q9UF11 243 aaPredicted RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 DUSP13Q9UII6 198 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 NUDT5Q9UKK9 219 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 CES1P1Q9UKY3 287 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 LAMTOR2Q9Y2Q5 125 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 KLF12Q9Y4X4 402 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 SIRT4Q9Y6E7 314 aaPredicted RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF780BQ9Y6R6 833 aa3.59□□□□□ -1.84
BRCA1-220ENST00000492859 MYH14Q7Z406 1995 aaKnown RBP3.59□□□□□ -1.84
BRCA1-220ENST00000492859 CEP164Q9UPV0 1460 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ADAMTSL3P82987 1691 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ZSWIM8A7E2V4 1837 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 MYH9P35579 1960 aaKnown RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 A0A0G2JK05 382 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 A0A1B0GX51 115 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 A1L4Q6 167 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 MYADML2A6NDP7 307 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 IDSB3KWA1 339 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 F5H697 171 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 J3KT08 172 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 J3QRK9 145 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 TNFRSF11BO00300 401 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SPRY3O43610 288 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CRLF1O75462 422 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PLAUP00749 431 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 IGLV1-40P01703 118 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PAEPP09466 180 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CT45A6P0DMU7 189 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CT45A5P0DMU8 189 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CT45A7P0DMV0 189 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CYP2D6P10635 497 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 TFPIP10646 304 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 RPL7P18124 248 aaKnown RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 GABRG2P18507 467 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 TCN2P20062 427 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 USF1P22415 310 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SRIP30626 198 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CHRNB4P30926 498 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PDX1P52945 283 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 DLX1P56177 255 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 OR1D5P58170 312 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 RPS14P62263 151 aaKnown RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 GNG5P63218 68 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 LTBQ06643 244 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 NAIPQ13075 1403 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 GPR18Q14330 331 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ELAVL1Q15717 326 aaKnown RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CR1LQ2VPA4 569 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ACOT6Q3I5F7 207 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CT45A1Q5HYN5 189 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 FNDC7Q5VTL7 733 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PRSS54Q6PEW0 395 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 WDR59Q6PJI9 974 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PARM1Q6UWI2 310 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SSH2Q76I76 1423 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ZAR1Q86SH2 424 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SLC47A2Q86VL8 602 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 GPR135Q8IZ08 494 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SPICQ8N5J4 248 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 FAM24BQ8N5W8 94 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 LRTM2Q8N967 370 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 OR10R2Q8NGX6 335 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 OR4F5Q8NH21 305 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CT45A3Q8NHU0 189 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PIFOQ8TCI5 191 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF418Q8TF45 676 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 TMED6Q8WW62 240 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SLC7A6Q92536 515 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 FGGYQ96C11 551 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ZMYND19Q96E35 227 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ADGRG7Q96K78 797 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 TEPSINQ96N21 525 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 GPER1Q99527 375 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 MLST8Q9BVC4 326 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SLC17A9Q9BYT1 436 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SMIM3Q9BZL3 60 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF106Q9H2Y7 1883 aaKnown RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 FBXL15Q9H469 300 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 VSIRQ9H7M9 311 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 SH2D2AQ9NP31 389 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 KCNJ16Q9NPI9 418 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 UBQLN4Q9NRR5 601 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF319Q9P2F9 582 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PRNDQ9UKY0 176 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 PKIGQ9Y2B9 76 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 TRAPPC8Q9Y2L5 1435 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 CCDC88BA6NC98 1476 aa3.58□□□□□ -1.84
BRCA1-220ENST00000492859 DENND4BO75064 1496 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 COL5A2P05997 1499 aaPredicted RBP3.58□□□□□ -1.84
BRCA1-220ENST00000492859 ECM29Q5VYK3 1845 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 KIF13BQ9NQT8 1826 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 ANKRD26Q9UPS8 1709 aa3.57□□□□□ -1.84
BRCA1-220ENST00000492859 RTEL1-TNFRSF6BF6WH68 1400 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms