RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	ZFAND3	Q9H8U3	227 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	REEP1	Q9H902	201 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ELL3	Q9HB65	397 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	SNTG1	Q9NSN8	517 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TAGLN3	Q9UI15	199 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF391	Q9UJN7	358 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	SNX13	Q9Y5W8	968 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	TNC	P24821	2201 aa		4.18	□□□□□ -1.74
SEC13-219	ENST00000492602	MYCBP2	O75592	4640 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CD300LB	A8K4G0	201 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	SERPINE3	A8MV23	424 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602		H3BN98	237 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602		M0R135	149 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CCRL2	O00421	344 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	NME4	O00746	187 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CDC42EP2	O14613	210 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	TBX1	O43435	398 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	XRCC3	O43542	346 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	PTBP3	O95758	552 aa	Known RBP	4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM107A	O95990	144 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	TFF1	P04155	84 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	AMY1A	P04745	511 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	AMY2A	P04746	511 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	ANXA2	P07355	339 aa	Known RBP	4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	H2BFM	P0C1H6	154 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	HSD17B1	P14061	328 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	HIST1H1C	P16403	213 aa	Known RBP	4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	OMP	P47874	163 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CDX1	P47902	265 aa	Predicted RBP	4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	ENTPD1	P49961	510 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC25A1	P53007	311 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	GMFB	P60983	142 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	DYNC1I2	Q13409	638 aa	Known RBP	4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	MEP1B	Q16820	701 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CCDC92	Q53HC0	331 aa	Predicted RBP	4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	MEST	Q5EB52	335 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	TEX38	Q6PEX7	206 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CORO6	Q6QEF8	472 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	KCTD8	Q6ZWB6	473 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM122B	Q7Z309	247 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	DPY19L4	Q7Z388	723 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	ZBTB46	Q86UZ6	589 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	PGAM4	Q8N0Y7	254 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	OR6V1	Q8N148	313 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	DRAM1	Q8N682	238 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CYB561A3	Q8NBI2	242 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	OR6K6	Q8NGW6	343 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	OR5K1	Q8NHB7	308 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF671	Q8TAW3	534 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	FAM81A	Q8TBF8	368 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	TEX47	Q8TBZ9	253 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF799	Q96GE5	643 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	NSL1	Q96IY1	281 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	C7orf34	Q96L11	122 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	TSSK6	Q9BXA6	273 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	PRRG3	Q9BZD7	231 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	OR52D1	Q9H346	318 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	NIPAL2	Q9H841	368 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	TBC1D23	Q9NUY8	699 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CD300A	Q9UGN4	299 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	CYB5R1	Q9UHQ9	305 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	TMEM14A	Q9Y6G1	99 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602		V9GYQ6	96 aa		4.17	□□□□□ -1.74
SEC13-219	ENST00000492602	HMCN2	Q8NDA2	5059 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	TRBV4-1	A0A0J9YWV2	114 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ACOD1	A6NK06	481 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ODF3B	A8MYP8	253 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602		B2RBV5	119 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF878	C9JN71	531 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	DCTN6	O00399	190 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	OVOL1	O14753	267 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	MTRF1	O75570	445 aa	Known RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	OR2F2	O95006	317 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	SERPINA3	P01011	423 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	IGF1	P05019	195 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ACSM4	P0C7M7	580 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	OR8U8	P0C7N1	319 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	INAFM2	P0DMQ5	153 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	PSKH1	P11801	424 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	GSTT1	P30711	240 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	RASSF2	P50749	326 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	HMGA2	P52926	109 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	CAV3	P56539	151 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	FXYD6P3	P58550	94 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	HIST1H3A	P68431	136 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	EIF2B1	Q14232	305 aa	Known RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	GK2	Q14410	553 aa	Predicted RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	MICA	Q29983	383 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	TEX30	Q5JUR7	227 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ATPAF1	Q5TC12	328 aa	Predicted RBP	4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	HIST2H3PS2	Q5TEC6	136 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	STUM	Q69YW2	141 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	SLC18B1	Q6NT16	456 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	ZNF788	Q6ZQV5	615 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	RASSF6	Q6ZTQ3	369 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	HIST2H3A	Q71DI3	136 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	DCXR	Q7Z4W1	244 aa		4.16	□□□□□ -1.74
SEC13-219	ENST00000492602	THAP5	Q7Z6K1	395 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms