RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 SERTM2A0A1B0GWG4 89 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 RIIAD1A6NNX1 92 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 PRR23D1E9PI22 279 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 RNASEK-C17orf49H0YIS7 233 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 CDIPTO14735 213 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 NPFFO15130 113 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 TBX1O43435 398 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 AKR7A2O43488 359 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 SNX3O60493 162 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 HTR3BO95264 441 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 OR4E1P0C645 316 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 PRR23D2P0DMB1 279 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 HSD11B1P28845 292 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 RPS27P42677 84 aaKnown RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 CX3CR1P49238 355 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 NKX2-5P52952 324 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 CAV3P56539 151 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 IFITM2Q01629 132 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 CRMP1Q14194 572 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 EIF2B1Q14232 305 aaKnown RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 MICAQ29983 383 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 C2orf68Q2NKX9 166 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF829Q3KNS6 432 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 LINC01590Q5TEZ4 76 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 PXDC1Q5TGL8 231 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 STUMQ69YW2 141 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 DHRS7BQ6IAN0 325 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF788Q6ZQV5 615 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 Q6ZSV7 163 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF511Q8NB15 262 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 PAPD5Q8NDF8 572 aaKnown RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 OR8D4Q8NGM9 314 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 OR6Q1Q8NGQ2 317 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 OR9Q1Q8NGQ5 310 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF486Q96H40 463 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 REEP6Q96HR9 211 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 INTS14Q96SY0 518 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 CCL13Q99616 98 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 BTBD10Q9BSF8 475 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 RTL8AQ9BWD3 113 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 FAM234AQ9H0X4 552 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 ALX4Q9H161 411 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-212ENST00000492407 MUC13Q9H3R2 512 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 SLA2Q9H6Q3 261 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 NIPAL2Q9H841 368 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 TCF7L1Q9HCS4 588 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 SNTG1Q9NSN8 517 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 HAO2Q9NYQ3 351 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 FBLN5Q9UBX5 448 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 V9GYQ6 96 aa7.5□□□□□ -1.21
HDAC3-212ENST00000492407 A0A0B4J293 547 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 NKX6-3A6NJ46 265 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 FAM25AB3EWG3 89 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 FAM25CB3EWG5 89 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 FAM25GB3EWG6 89 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 E9PI62 339 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 ACOT8O14734 319 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 GLCEO94923 617 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 KRT8P05787 483 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 FABP1P07148 127 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 ANXA2P07355 339 aaKnown RBP7.49□□□□□ -1.21
HDAC3-212ENST00000492407 LYNP07948 512 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 SLC2A1P11166 492 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 DBTP11182 482 aaKnown RBP7.49□□□□□ -1.21
HDAC3-212ENST00000492407 PSKH1P11801 424 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 HOXB6P17509 224 aaKnown RBP7.49□□□□□ -1.21
HDAC3-212ENST00000492407 RAB3AP20336 220 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 S100PP25815 95 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 OPRL1P41146 370 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 KRTAP10-3P60369 221 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 SRSF4Q08170 494 aaKnown RBP7.49□□□□□ -1.21
HDAC3-212ENST00000492407 FLOT2Q14254 428 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 WDR86Q86TI4 376 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 Q8N7P7 452 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 BEND2Q8NDZ0 799 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 OR9Q2Q8NGE9 314 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 OR51L1Q8NGJ5 315 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 OR5D13Q8NGL4 314 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 OR5P3Q8WZ94 311 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 NEU1Q99519 415 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 SEC22CQ9BRL7 303 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 ABHD6Q9BV23 337 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 PAPOLGQ9BWT3 736 aaKnown RBP7.49□□□□□ -1.21
HDAC3-212ENST00000492407 ONECUT1Q9UBC0 465 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 DNAJB11Q9UBS4 358 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 ARL2BPQ9Y2Y0 163 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 RHBDD3Q9Y3P4 386 aa7.49□□□□□ -1.21
HDAC3-212ENST00000492407 IGHV3OR15-7A0A075B7D8 119 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 TRBV23-1A0A0A0MS06 115 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 ZNF816-ZNF321PA0A0X1KG74 233 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 A0A1W2PPH5 198 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 ARRDC5A6NEK1 342 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 CCRL2O00421 344 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 SIGLEC5O15389 551 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
HDAC3-212ENST00000492407 GNAO1P09471 354 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 H2BFMP0C1H6 154 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 PF4V1P10720 104 aa7.48□□□□□ -1.21
HDAC3-212ENST00000492407 AMY2BP19961 511 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms