RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	HTR1F	P30939	366 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	RPL31	P62899	125 aa	Known RBP	12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	LY6E	Q16553	131 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	AANAT	Q16613	207 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZIK1	Q3SY52	487 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	DMRTC1	Q5HYR2	192 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	SLC25A30	Q5SVS4	291 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF573	Q86YE8	665 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	C1QL4	Q86Z23	238 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	MKX	Q8IYA7	352 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF561	Q8N587	486 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	C17orf50	Q8WW18	174 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	CNN2	Q99439	309 aa	Known RBP	12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	TTTY10	Q9BZA0	68 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	MEGF9	Q9H1U4	602 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	RANBP3	Q9H6Z4	567 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	HEXA-AS1	Q9H8Q6	139 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	MOB1A	Q9H8S9	216 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	C8orf4	Q9NR00	106 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	C19orf12	Q9NSK7	152 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	WARS2	Q9UGM6	360 aa	Known RBP	12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	POLDIP2	Q9Y2S7	368 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	TET2	Q6N021	2002 aa	Predicted RBP	12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170		J3QT63	122 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	CASQ2	O14958	399 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	PGA5	P0DJD9	388 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	HAAO	P46952	286 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	SNRPG	P62308	76 aa	Known RBP	12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	MFGE8	Q08431	387 aa	Predicted RBP	12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	TMED1	Q13445	227 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	CD177	Q8N6Q3	437 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	PACRGL	Q8N7B6	248 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	DTX3	Q8N9I9	347 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	OR2T6	Q8NHC8	308 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	RORB	Q92753	470 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	MNT	Q99583	582 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	IMPAD1	Q9NX62	359 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	GTF2A1L	Q9UNN4	478 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	COPS3	Q9UNS2	423 aa		12.48	□□□□□ -0.41
MRPL55-231	ENST00000492170	ERICH4	A6NGS2	130 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	PRR32	B1ATL7	298 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	LOC110117498-PIK3R3	F6TDL0	507 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	SLC16A6	O15403	523 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	NXPH2	O95156	264 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	GABRB1	P18505	474 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	PEX2	P28328	305 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	PRDX2	P32119	198 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	KIR2DS4	P43632	304 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	EFNB2	P52799	333 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	LGALS4	P56470	323 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	CLVS2	Q5SYC1	327 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	BCL2L15	Q5TBC7	163 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	LIAT1	Q6ZQX7	453 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	PPP1R35	Q8TAP8	253 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	AJUBA	Q96IF1	538 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF488	Q96MN9	340 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	NPFFR1	Q9GZQ6	430 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	FAM118A	Q9NWS6	357 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	SMPD3	Q9NY59	655 aa	Predicted RBP	12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	SIGLEC9	Q9Y336	463 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	GMPPB	Q9Y5P6	360 aa		12.47	□□□□□ -0.41
MRPL55-231	ENST00000492170	LOC100130705	A0A1B0GUX0	176 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	SYNGR1	O43759	233 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	NOS1AP	O75052	506 aa	Predicted RBP	12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	TTR	P02766	147 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	COX7A1	P24310	79 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	BMX	P51813	675 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	ERVFRD-1	P60508	538 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	MEDAG	Q5VYS4	303 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	LPCAT4	Q643R3	524 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	TMEM200B	Q69YZ2	307 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	SLC35F2	Q8IXU6	374 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	KLHDC1	Q8N7A1	406 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	OR4M1	Q8NGD0	313 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	OR2T27	Q8NH04	317 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	RFK	Q969G6	155 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	PPP1R14A	Q96A00	147 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	NRIP2	Q9BQI9	281 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	DCLRE1B	Q9H816	532 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	GPR173	Q9NS66	373 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	CLN6	Q9NWW5	311 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170		R4GMQ9	66 aa		12.46	□□□□□ -0.41
MRPL55-231	ENST00000492170	PQLC2L	A1A4F0	135 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	ENTPD6	O75354	484 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	CCL3L1	P16619	93 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	PAX6	P26367	422 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	CEBPD	P49716	269 aa	Predicted RBP	12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	CXCR4	P61073	352 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	TMEM42	Q69YG0	159 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	CRIP3	Q6Q6R5	217 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	ENTHD1	Q8IYW4	607 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	APOL4	Q9BPW4	351 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	OR14J1	Q9UGF5	321 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	OR52A1	Q9UKL2	312 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170	FOXJ3	Q9UPW0	622 aa		12.45	□□□□□ -0.42
MRPL55-231	ENST00000492170		V9GYS6	101 aa		12.45	□□□□□ -0.42

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