RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BCL2L15Q5TBC7 163 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 DHRS7BQ6IAN0 325 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 C11orf88Q6PI97 169 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 ZDHHC13Q8IUH4 622 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 GID4Q8IVV7 300 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 MKXQ8IYA7 352 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 Q8N2B8 174 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 CCDC54Q8NEL0 328 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 TMEM185AQ8NFB2 350 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 OR2T27Q8NH04 317 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 WIPF2Q8TF74 440 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 RORBQ92753 470 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 C10orf35Q96D05 121 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF488Q96MN9 340 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 SSX3Q99909 188 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 OSBPL10Q9BXB5 764 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 CDCA4Q9BXL8 241 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 GABARAPL3Q9BY60 117 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 RANBP3Q9H6Z4 567 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 HEXA-AS1Q9H8Q6 139 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 KRT84Q9NSB2 600 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 MTCH1Q9NZJ7 389 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 ENOPH1Q9UHY7 261 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 IKZF2Q9UKS7 526 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 POLDIP2Q9Y2S7 368 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 AP4S1Q9Y587 144 aa6.8□□□□□ -1.32
SMARCB1-207ENST00000491967 IGKV1-27A0A075B6S5 117 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PPH5 198 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 BTBD17A6NE02 478 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 ANKRD61A6NGH8 418 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 METTL15A6NJ78 407 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 ODF3BA8MYP8 253 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF670-ZNF695F2Z2N8 137 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 F8VVB4 439 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 F8VWA3 439 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 H0YAE9 185 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 H3BUX3 64 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 SLC1A7O00341 560 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 PAHP00439 452 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF273Q14593 569 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 LRRC75BQ2VPJ9 315 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 FDX2Q6P4F2 183 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 LIAT1Q6ZQX7 453 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 PLEKHG7Q6ZR37 379 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 TCF23Q7RTU1 214 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 ANGPTL5Q86XS5 388 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 EGFL6Q8IUX8 553 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 DNAAF1Q8NEP3 725 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 OR11H6Q8NGC7 330 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 OR8J1Q8NGP2 316 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 TRUB1Q8WWH5 349 aaKnown RBP6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 CENPNQ96H22 339 aaPredicted RBP6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 IL4I1Q96RQ9 567 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 CIB1Q99828 191 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 CHST5Q9GZS9 411 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 TCF7L1Q9HCS4 588 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 GPR173Q9NS66 373 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 USE1Q9NZ43 259 aa6.79□□□□□ -1.32
SMARCB1-207ENST00000491967 hCG_1809904A0A1W2PP81 198 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PPE2 198 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PR64 198 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PRD5 423 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PRF3 423 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PRM7 423 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 A0A1W2PRV1 198 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 TMEM82A0PJX8 343 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 ANGPTL7O43827 346 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 CHST1O43916 411 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 ATP5HO75947 161 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 NXPH2O95156 264 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 TSPAN15O95858 294 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 ISG15P05161 165 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 KRT8P05787 483 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 CHRM2P08172 466 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 FCGR1AP12314 374 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 CCL3L1P16619 93 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 GABRA5P31644 462 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 CEBPDP49716 269 aaPredicted RBP6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 DYNLT3P51808 116 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 FUT6P51993 359 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 ERVFRD-1P60508 538 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 COL10A1Q03692 680 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 ZNF85Q03923 595 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 MEF2CQ06413 473 aaPredicted RBP6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 HERPUD1Q15011 391 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 LDLRAD2Q5SZI1 272 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 KPRPQ5T749 579 aaPredicted RBP6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 ASRGL1Q7L266 308 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 KCTD20Q7Z5Y7 419 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 AMIGO2Q86SJ2 522 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 COMMD2Q86X83 199 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 FAM185AQ8N0U4 392 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 DYNAPQ8N1N2 210 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 PRSS35Q8N3Z0 413 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 DTX3Q8N9I9 347 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 OR51G2Q8NGK0 314 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 EME1Q96AY2 570 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 MALSU1Q96EH3 234 aa6.78□□□□□ -1.32
SMARCB1-207ENST00000491967 TTTY10Q9BZA0 68 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms