RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 LOC100130705A0A1B0GUX0 176 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 PF4V1P10720 104 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 COX7A1P24310 79 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 POLR2IP36954 125 aaKnown RBP11.69□□□□□ -0.54
SSR4-212ENST00000491833 CAPZA1P52907 286 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 SLC35A2P78381 396 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 EIF2B1Q14232 305 aaKnown RBP11.69□□□□□ -0.54
SSR4-212ENST00000491833 PLA1AQ53H76 456 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 NXNL2Q5VZ03 156 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 WFDC9Q8NEX5 89 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 BBS1Q8NFJ9 593 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 CNN2Q99439 309 aaKnown RBP11.69□□□□□ -0.54
SSR4-212ENST00000491833 ADI1Q9BV57 179 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 NMNAT2Q9BZQ4 307 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 PRSS22Q9GZN4 317 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 WNT10AQ9GZT5 417 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 RGCCQ9H4X1 137 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 ABCB10Q9NRK6 738 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 C19orf12Q9NSK7 152 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 CLN6Q9NWW5 311 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 DNAJC27Q9NZQ0 273 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 PITPNC1Q9UKF7 332 aa11.69□□□□□ -0.54
SSR4-212ENST00000491833 DNAH9Q9NYC9 4486 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 IGKV1D-17A0A075B6S4 117 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 A0A1W2PRX2 142 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 ZNF850A8MQ14 1090 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 VGLL3A8MV65 326 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 ZNF593O00488 134 aaPredicted RBP11.68□□□□□ -0.54
SSR4-212ENST00000491833 PF4P02776 101 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 ALDOBP05062 364 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 MRPL3P09001 348 aaKnown RBP11.68□□□□□ -0.54
SSR4-212ENST00000491833 VDAC2P45880 294 aaPredicted RBP11.68□□□□□ -0.54
SSR4-212ENST00000491833 HSPA13P48723 471 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 ZNF121P58317 390 aaPredicted RBP11.68□□□□□ -0.54
SSR4-212ENST00000491833 CD69Q07108 199 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 DEFB121Q5J5C9 76 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 TEX30Q5JUR7 227 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 MEDAGQ5VYS4 303 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 SHFQ7M4L6 423 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 PRSS45Q7RTY3 260 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 ZNF511Q8NB15 262 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 RPS4Y2Q8TD47 263 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 TRUB1Q8WWH5 349 aaKnown RBP11.68□□□□□ -0.54
SSR4-212ENST00000491833 OR5P3Q8WZ94 311 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 FOXRED1Q96CU9 486 aaPredicted RBP11.68□□□□□ -0.54
SSR4-212ENST00000491833 PGAM5Q96HS1 289 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 RNF170Q96K19 258 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 Q96MT0 163 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 OR5M11Q96RB7 305 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 OCSTAMPQ9BR26 566 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 FAM118AQ9NWS6 357 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 ZNF222Q9UK12 451 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.68□□□□□ -0.54
SSR4-212ENST00000491833 LRP12Q9Y561 859 aa11.68□□□□□ -0.54
SSR4-212ENST00000491833 hCG_1809904A0A1W2PP81 198 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 A0A1W2PPE2 198 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 A0A1W2PR64 198 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 A0A1W2PRV1 198 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 SELENOFO60613 162 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 PSG2P11465 335 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 DCTDP32321 178 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 CAPGP40121 348 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 ERVFRD-1P60508 538 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 IL18R1Q13478 541 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 IZUMO2Q6UXV1 221 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 LHFPL4Q7Z7J7 247 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 TMEM219Q86XT9 240 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 ZDHHC23Q8IYP9 409 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 C8orf59Q8N0T1 100 aaPredicted RBP11.67□□□□□ -0.54
SSR4-212ENST00000491833 HPSE2Q8WWQ2 592 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 PIGCQ92535 297 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 RCC1LQ96I51 464 aaKnown RBP11.67□□□□□ -0.54
SSR4-212ENST00000491833 BRD7Q9NPI1 651 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 WARS2Q9UGM6 360 aaKnown RBP11.67□□□□□ -0.54
SSR4-212ENST00000491833 LAMP5Q9UJQ1 280 aa11.67□□□□□ -0.54
SSR4-212ENST00000491833 A6NDX4 124 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 E9PQ18 207 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 DUS4LO95620 317 aaKnown RBP11.66□□□□□ -0.54
SSR4-212ENST00000491833 CST4P01036 141 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 ACKR3P25106 362 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 VHLP40337 213 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 AQP4P55087 323 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 RPL31P62899 125 aaKnown RBP11.66□□□□□ -0.54
SSR4-212ENST00000491833 FAM76BQ5HYJ3 339 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 CCBE1Q6UXH8 406 aaPredicted RBP11.66□□□□□ -0.54
SSR4-212ENST00000491833 ZNF782Q6ZMW2 699 aaPredicted RBP11.66□□□□□ -0.54
SSR4-212ENST00000491833 MEPCEQ7L2J0 689 aaKnown RBP11.66□□□□□ -0.54
SSR4-212ENST00000491833 THAP5Q7Z6K1 395 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 TIGD4Q8IY51 512 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 RNF133Q8WVZ7 376 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 SDSLQ96GA7 329 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 HIST1H2AAQ96QV6 131 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 FGF23Q9GZV9 251 aaPredicted RBP11.66□□□□□ -0.54
SSR4-212ENST00000491833 ZNF319Q9P2F9 582 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 TBL2Q9Y4P3 447 aaKnown RBP11.66□□□□□ -0.54
SSR4-212ENST00000491833 TMEM14AQ9Y6G1 99 aa11.66□□□□□ -0.54
SSR4-212ENST00000491833 WI2-2373I1.2A0A1W2PRP0 233 aa11.65□□□□□ -0.54
SSR4-212ENST00000491833 FAM90A8PA6NJQ4 464 aa11.65□□□□□ -0.54
SSR4-212ENST00000491833 SLC16A6O15403 523 aa11.65□□□□□ -0.54
SSR4-212ENST00000491833 RHBDL1O75783 438 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms