RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 HAGHLQ6PII5 290 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 C12orf54Q6X4T0 127 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 LRRC28Q86X40 367 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 CALHM1Q8IU99 346 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 SPICQ8N5J4 248 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 TSPAN14Q8NG11 270 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 OR4M2Q8NGB6 313 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 TRMT10AQ8TBZ6 339 aaKnown RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 NPRL2Q8WTW4 380 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 LRRC29Q8WV35 223 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 TMED9Q9BVK6 235 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 TAS2R4Q9NYW5 299 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 CKLFQ9UBR5 152 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 OPN4Q9UHM6 478 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 PCDHB10Q9UN67 800 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 SF3B6Q9Y3B4 125 aaKnown RBP12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 PPIAL4AQ9Y536 164 aa12.53□□□□□ -0.4
CDC42SE1-205ENST00000491825 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 NOS1APO75052 506 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 ALDOBP05062 364 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 OCMP0CE72 109 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 ADRA2CP18825 462 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 CPT2P23786 658 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 ATP1B3P54709 279 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 KCNJ8Q15842 424 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 ACSM3Q53FZ2 586 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 SYT6Q5T7P8 510 aaPredicted RBP12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 TEX36Q5VZQ5 186 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 UNQ9370/PRO34162Q6UXP9 181 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 POC1AQ8NBT0 407 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 OR51A2Q8NGJ7 313 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZNF671Q8TAW3 534 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 FAM216AQ8WUB2 273 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 C12orf43Q96C57 262 aaKnown RBP12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 TMEM138Q9NPI0 162 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.41
CDC42SE1-205ENST00000491825 TMEM89A2RUT3 159 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 OOEPA6NGQ2 149 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 LGALS8O00214 317 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 CCRL2O00421 344 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 PIN1P1O15428 100 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 RHBDL1O75783 438 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 INMTO95050 263 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 PGA5P0DJD9 388 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 MUC1P15941 1255 aaPredicted RBP12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 EGR1P18146 543 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 GALP22466 123 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 PSMB9P28065 219 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 RBMXP38159 391 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 MTCP1P56278 107 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 RPS25P62851 125 aaKnown RBP12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 TUSC1Q2TAM9 212 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 DCAF12L2Q5VW00 463 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 CRIP3Q6Q6R5 217 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 CD200R1LQ6Q8B3 271 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 MUL1Q969V5 352 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 GAL3ST1Q99999 423 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 TMEM165Q9HC07 324 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 NOX4Q9NPH5 578 aa12.51□□□□□ -0.41
CDC42SE1-205ENST00000491825 TRAV8-7A0A075B6U6 113 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 TRAV38-1A0A0B4J264 116 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 PPIAL4CA0A0B4J2A2 164 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 ISPDA4D126 451 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 MAGEB3O15480 346 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 NDUFA2O43678 99 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 HCKP08631 526 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 UCHL1P09936 223 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 GATA3P23771 443 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 BDKRB2P30411 391 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 CD80P33681 288 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 ERVK11-1P61568 191 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 ACTG1P63261 375 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 INSL4Q14641 139 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 KISS1Q15726 138 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 TMEM91Q6ZNR0 172 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 DCDC5Q6ZRR9 648 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 ANGPTL5Q86XS5 388 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 FAM90A1Q86YD7 464 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 NKAIN3Q8N8D7 197 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 TMEM203Q969S6 136 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 SLC6A7Q99884 636 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 HES4Q9HCC6 221 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 VCX3AQ9NNX9 186 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 ESM1Q9NQ30 184 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 RASL12Q9NYN1 266 aa12.5□□□□□ -0.41
CDC42SE1-205ENST00000491825 CEACAM18A8MTB9 384 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 F5H0A9 414 aaPredicted RBP12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 C3orf80F5H4A9 247 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 TRIM77I1YAP6 450 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 AKR7A2O43488 359 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 SYNGR1O43759 233 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZFP36P26651 326 aaKnown RBP12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 TGFBR2P37173 567 aa12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 GP2P55259 537 aaKnown RBP12.49□□□□□ -0.41
CDC42SE1-205ENST00000491825 ZP1P60852 638 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms