RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 OGFRL1Q5TC84 451 aaPredicted RBP14.91□□□□□ -0.02
COL9A3-214ENST00000490398 METTL11BQ5VVY1 283 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 XAF1Q6GPH4 301 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 VMO1Q7Z5L0 202 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 SYS1Q8N2H4 156 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 CCDC54Q8NEL0 328 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 TMEM185AQ8NFB2 350 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 C8orf46Q8TAG6 207 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 SLAMF9Q96A28 289 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 MED30Q96HR3 178 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 JMJD8Q96S16 334 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 PKIBQ9C010 78 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 SIRT7Q9NRC8 400 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 RASL12Q9NYN1 266 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 IL36RNQ9UBH0 155 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 SLC7A11Q9UPY5 501 aa14.91□□□□□ -0.02
COL9A3-214ENST00000490398 FBN3Q75N90 2809 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 CASQ2O14958 399 aaPredicted RBP14.9□□□□□ -0.02
COL9A3-214ENST00000490398 GATBO75879 557 aaKnown RBP14.9□□□□□ -0.02
COL9A3-214ENST00000490398 NXPH2O95156 264 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 ZFPL1O95159 310 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 ATF1P18846 271 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 IL24Q13007 206 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 SLC9A3R2Q15599 337 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 C11orf91Q3C1V1 193 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 GPR157Q5UAW9 335 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 CRIP3Q6Q6R5 217 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 SLC25A26Q70HW3 274 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 PACRGLQ8N7B6 248 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 PDCD1LG2Q9BQ51 273 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 INPP5EQ9NRR6 644 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 C19orf12Q9NSK7 152 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 OR14J1Q9UGF5 321 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 POLDIP2Q9Y2S7 368 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 KPTNQ9Y664 436 aa14.9□□□□□ -0.02
COL9A3-214ENST00000490398 CALCBP10092 127 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 PRTN3P24158 256 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 AZGP1P25311 298 aaKnown RBP14.89□□□□□ -0.03
COL9A3-214ENST00000490398 NPBWR2P48146 333 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 CAV3P56539 151 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 ACTG1P63261 375 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 KLRD1Q13241 179 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 SMIM21Q3B7S5 101 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 KLHL22Q53GT1 634 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 OR2G6Q5TZ20 316 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 RBMS3Q6XE24 437 aaKnown RBP14.89□□□□□ -0.03
COL9A3-214ENST00000490398 PNKDQ8N490 385 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 PIP4P2Q8N4L2 257 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 DHRSXQ8N5I4 330 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 ZNF676Q8N7Q3 588 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 PP6455Q8WZ26 134 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 RGP1Q92546 391 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-214ENST00000490398 RFT1Q96AA3 541 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 C10orf35Q96D05 121 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 BORCS8Q96FH0 119 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 SPACA5Q96QH8 159 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 CLEC2DQ9UHP7 191 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 HHLA2Q9UM44 414 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 SIRT4Q9Y6E7 314 aaPredicted RBP14.89□□□□□ -0.03
COL9A3-214ENST00000490398 TRRAPQ9Y4A5 3859 aa14.89□□□□□ -0.03
COL9A3-214ENST00000490398 IGHV1-69DA0A0B4J2H0 117 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 A0A1W2PRD5 423 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 A0A1W2PRF3 423 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 A0A1W2PRM7 423 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 RNASEK-C17orf49H0YIS7 233 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 GPR37O15354 613 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 HOXA3O43365 443 aaPredicted RBP14.88□□□□□ -0.03
COL9A3-214ENST00000490398 LALBAP00709 142 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 SERPINA3P01011 423 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 IGHV1-69P01742 117 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 ZNF20P17024 532 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 CAPZA1P52907 286 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 ERVFRD-1P60508 538 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 PDCD1Q15116 288 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 TTC23Q5W5X9 447 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 ASPHD2Q6ICH7 369 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 UTS2BQ765I0 119 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 OR13C3Q8NGS6 347 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 OR13C9Q8NGT0 318 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 TNFRSF14Q92956 283 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 CEP19Q96LK0 163 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 JAM3Q9BX67 310 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 PRDM13Q9H4Q3 707 aa14.88□□□□□ -0.03
COL9A3-214ENST00000490398 IGKV1-12A0A0C4DH73 117 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 A0A0U1RQK1 487 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 MEX3AA1L020 520 aaKnown RBP14.87□□□□□ -0.03
COL9A3-214ENST00000490398 TMEM89A2RUT3 159 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 SPRY1O43609 319 aaPredicted RBP14.87□□□□□ -0.03
COL9A3-214ENST00000490398 IGKV1D-12P01611 117 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 BCL3P20749 454 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 POU3F4P49335 361 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 DOC2BQ14184 412 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 CNN3Q15417 329 aaKnown RBP14.87□□□□□ -0.03
COL9A3-214ENST00000490398 OR4M1Q8NGD0 313 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 NRG4Q8WWG1 115 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 GATAD2BQ8WXI9 593 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 GGHQ92820 318 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 TNFRSF19Q9NS68 423 aa14.87□□□□□ -0.03
COL9A3-214ENST00000490398 RBFOX1Q9NWB1 397 aaKnown RBP14.87□□□□□ -0.03
COL9A3-214ENST00000490398 A0A1W2PQ09 198 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms