RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SPNS3Q6ZMD2 512 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM179Q6ZVK1 233 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 Q8N402 240 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF614Q8N883 585 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 DUSP18Q8NEJ0 188 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF675Q8TD23 568 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 C22orf15Q8WYQ4 148 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RAB3CQ96E17 227 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MRPS24Q96EL2 167 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ATXN7L3BQ96GX2 97 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 SRXN1Q9BYN0 137 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PITPNC1Q9UKF7 332 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 FBXL3Q9UKT7 428 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 UBQLN1Q9UMX0 589 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RCL1Q9Y2P8 373 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OBSL1O75147 1896 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 NYNRINQ9P2P1 1898 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PTPRJQ12913 1337 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1B0GU03 582 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1B0GX12 115 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1W2PR80 420 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 C9orf170A2RU37 121 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OR2AT4A6NND4 320 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 FOXI3A8MTJ6 420 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PRAC2D3DTV9 90 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 GPR31O00270 319 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PLA2G10O15496 165 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MMP12P39900 470 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 CDKN2BP42772 138 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 CCR6P51684 374 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PKIAP61925 76 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PIGHQ14442 188 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MAD2L1BPQ15013 274 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OR8G1Q15617 311 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 FAM189A2Q15884 450 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 UNC50Q53HI1 259 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MEDAGQ5VYS4 303 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 BSPRYQ5W0U4 402 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OR5M10Q6IEU7 315 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF613Q6PF04 617 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 LCLAT1Q6UWP7 414 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 BAIAP2L2Q6UXY1 529 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MBOAT1Q6ZNC8 495 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 CMC1Q7Z7K0 106 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PXT1Q8NFP0 134 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OR9I1Q8NGQ6 314 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OR10J5Q8NHC4 309 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RXFP4Q8TDU9 374 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 SDR42E1Q8WUS8 393 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ACOT11Q8WXI4 607 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MED8Q96G25 268 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 FCRL1Q96LA6 429 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MCCC1Q96RQ3 725 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 SUCNR1Q9BXA5 334 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RNF167Q9H6Y7 350 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 SLC17A5Q9NRA2 495 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF256Q9Y2P7 627 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 NUBP2Q9Y5Y2 271 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 A0A1W2PQL4 384 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM72A0PK05 275 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 APOC4-APOC2K7ER74 178 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 SLC37A4O43826 429 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 GPX5O75715 221 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 GATBO75879 557 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ANXA9O76027 345 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 IFNGP01579 166 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 APOC2P02655 101 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RPN2P04844 631 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PRSS2P07478 247 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 LINC00614P0C842 121 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MUC1P15941 1255 aaPredicted RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 HOXB6P17509 224 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PSMA1P25786 263 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 HTR1EP28566 365 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PPP2R1BP30154 601 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 KIR3DL2P43630 455 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 PPP3R1P63098 170 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RBBP4Q09028 425 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RSU1Q15404 277 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MPPED2Q15777 294 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF239Q16600 458 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ASPRV1Q53RT3 343 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RNASE10Q5GAN6 216 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 REEP3Q6NUK4 255 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 HSDL2Q6YN16 418 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ABHD12Q8N2K0 398 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ARRDC1Q8N5I2 433 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ATP6V1C2Q8NEY4 427 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 OR5T1Q8NG75 326 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 CERS2Q96G23 380 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF681Q96N22 645 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 RBBP8Q99708 897 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 GGACTQ9BVM4 153 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ULBP2Q9BZM5 246 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 CHIAQ9BZP6 476 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ARL6Q9H0F7 186 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 SMCO4Q9NRQ5 59 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 NDRG2Q9UN36 371 aaKnown RBP2.3□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF257Q9Y2Q1 563 aa2.3□□□□□ -2.04
UBXN4-208ENST00000490163 MEIKINA0A087WXM9 373 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms