RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 CTSZQ9UBR2 303 aa9.23□□□□□ -0.93
CPSF7-212ENST00000489728 CKLFQ9UBR5 152 aa9.23□□□□□ -0.93
CPSF7-212ENST00000489728 FN1P02751 2386 aaKnown RBP9.23□□□□□ -0.93
CPSF7-212ENST00000489728 NF1P21359 2839 aa9.23□□□□□ -0.93
CPSF7-212ENST00000489728 NIPBLQ6KC79 2804 aaeCLIP9.23□□□□□ -0.93
CPSF7-212ENST00000489728 TRBV5-7A0A0A0MS05 114 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 IGHV2-70DA0A0C4DH43 119 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 SIGLEC5O15389 551 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 TMPRSS2O15393 492 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 MAGEB3O15480 346 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 SYNGR1O43759 233 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 ENSAO43768 121 aaKnown RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 NXPH2O95156 264 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 LIPFP07098 398 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 FAM157CP0CG43 387 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 EEF1B2P24534 225 aaKnown RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 PSMA1P25786 263 aaKnown RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 ZFP36P26651 326 aaKnown RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 RBMXP38159 391 aaKnown RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 BMXP51813 675 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 CAV3P56539 151 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 SEC61A1P61619 476 aaKnown RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 PAX2Q02962 417 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 MLLT11Q13015 90 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 PDZK1IP1Q13113 114 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 SCGB2A2Q13296 93 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 TPBGQ13641 420 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 MED22Q15528 200 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 TRAM1Q15629 374 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 DMRTC1Q5HYR2 192 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 FAM120AOSQ5T036 256 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 FIP1L1Q6UN15 594 aaKnown RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 BTNL3Q6UXE8 466 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 ZNF788Q6ZQV5 615 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 SLC25A26Q70HW3 274 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 ZNF367Q7RTV3 350 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 ANGPTL5Q86XS5 388 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 CDH26Q8IXH8 852 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 SVOPQ8N4V2 548 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 ZNF561Q8N587 486 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 C19orf18Q8NEA5 215 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 DACT3Q96B18 629 aaPredicted RBP9.22□□□□□ -0.93
CPSF7-212ENST00000489728 SDSLQ96GA7 329 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 TMEM138Q9NPI0 162 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 ZNF222Q9UK12 451 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 INSIG2Q9Y5U4 225 aa9.22□□□□□ -0.93
CPSF7-212ENST00000489728 IGKV1D-17A0A075B6S4 117 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 LOC105371242A0A075B767 164 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 IGHV3OR15-7A0A075B7D8 119 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 ZNF879B4DU55 563 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 TRAPPC2LH3BP13 241 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 DVL1O14640 695 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 PHF1O43189 567 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-212ENST00000489728 NDUFB3O43676 98 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 HCKP08631 526 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 PSG2P11465 335 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 IGFBP3P17936 291 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-212ENST00000489728 SOX2P48431 317 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 HOXA4Q00056 320 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-212ENST00000489728 KISS1Q15726 138 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 LRRC10Q5BKY1 277 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 SPIN3Q5JUX0 258 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 ZFP41Q8N8Y5 198 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 PXT1Q8NFP0 134 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 RAB40AQ8WXH6 277 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 PHYHIPQ92561 330 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 SGCDQ92629 289 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 FCGR1BQ92637 280 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 UFD1Q92890 307 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 GAFA1Q96PS6 74 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 DERL3Q96Q80 235 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 OR5M11Q96RB7 305 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 MRI1Q9BV20 369 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 BEX2Q9BXY8 128 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 TMPRSS13Q9BYE2 586 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 CCDC90BQ9GZT6 254 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 TAS2R4Q9NYW5 299 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 MTCH1Q9NZJ7 389 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 FOXJ3Q9UPW0 622 aa9.21□□□□□ -0.94
CPSF7-212ENST00000489728 SONP18583 2426 aaKnown RBP9.21□□□□□ -0.94
CPSF7-212ENST00000489728 KIR2DS1A0A191URI9 304 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 KDM4BO94953 1096 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 CPEP16870 476 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 BDKRB2P30411 391 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 ZP1P60852 638 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 PAX8Q06710 450 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 DOC2BQ14184 412 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 KCTD21Q4G0X4 260 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 ASPHD2Q6ICH7 369 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 FAHD2BQ6P2I3 314 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-212ENST00000489728 C1QL2Q7Z5L3 287 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 NKAIN3Q8N8D7 197 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 PNLDC1Q8NA58 520 aaKnown RBP9.2□□□□□ -0.94
CPSF7-212ENST00000489728 OR13C5Q8NGS8 318 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 C8orf46Q8TAG6 207 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 FAHD2AQ96GK7 314 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 OR14A2Q96R54 314 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 CCL13Q99616 98 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 MGLLQ99685 303 aa9.2□□□□□ -0.94
CPSF7-212ENST00000489728 FAM234AQ9H0X4 552 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms