RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 NRIP2Q9BQI9 281 aa12.02□□□□□ -0.49
HLA-F-229ENST00000489502 YTHDF1Q9BYJ9 559 aaKnown RBP12.02□□□□□ -0.49
HLA-F-229ENST00000489502 NEK6Q9HC98 313 aa12.02□□□□□ -0.49
HLA-F-229ENST00000489502 SMURF1Q9HCE7 757 aa12.02□□□□□ -0.49
HLA-F-229ENST00000489502 NLKQ9UBE8 527 aa12.02□□□□□ -0.49
HLA-F-229ENST00000489502 MIOXQ9UGB7 285 aa12.02□□□□□ -0.49
HLA-F-229ENST00000489502 ANK3Q12955 4377 aaKnown RBP12.02□□□□□ -0.49
HLA-F-229ENST00000489502 DOCK11Q5JSL3 2073 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 INAFM1C9JVW0 142 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 PIN1P1O15428 100 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 FCN3O75636 299 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 MUC1P15941 1255 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-229ENST00000489502 FSTP19883 344 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 AMY2BP19961 511 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 CEBPDP49716 269 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-229ENST00000489502 TPBGQ13641 420 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 KCNJ8Q15842 424 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 SMIM21Q3B7S5 101 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 ACP7Q6ZNF0 438 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 GLCCI1Q86VQ1 547 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 OR52N4Q8NGI2 321 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 TMEM186Q96B77 213 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 TMIGD2Q96BF3 282 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 CEP19Q96LK0 163 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 SSBP3Q9BWW4 388 aaPredicted RBP12.01□□□□□ -0.49
HLA-F-229ENST00000489502 NOX4Q9NPH5 578 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 HIF1ANQ9NWT6 349 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 KCNS2Q9ULS6 477 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 LRCH1Q9Y2L9 728 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 NAV3Q8IVL0 2385 aa12.01□□□□□ -0.49
HLA-F-229ENST00000489502 IGKV1-12A0A0C4DH73 117 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 NKX6-3A6NJ46 265 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 OR2AT4A6NND4 320 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 A8MV72 311 aaPredicted RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 A8MXK9 166 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 GABRPO00591 440 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 TNFRSF13BO14836 293 aaPredicted RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 TMPRSS2O15393 492 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 MRPS14O60783 128 aaKnown RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 NOS1APO75052 506 aaPredicted RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 IGKV1D-12P01611 117 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 CALCBP10092 127 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 CPEP16870 476 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 BCL3P20749 454 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 PCMT1P22061 227 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 PSMB9P28065 219 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 NPBWR2P48146 333 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 GNB2P62879 340 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 KISS1Q15726 138 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 SSX1Q16384 188 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 DDI2Q5TDH0 399 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 SATL1Q86VE3 508 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 PHC2Q8IXK0 858 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 ANGPTL6Q8NI99 470 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 EMG1Q92979 244 aaKnown RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 C12orf43Q96C57 262 aaKnown RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 GAFA1Q96PS6 74 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 FAM192AQ9GZU8 254 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 ISYNA1Q9NPH2 558 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 RBFOX1Q9NWB1 397 aaKnown RBP12□□□□□ -0.49
HLA-F-229ENST00000489502 CKLFQ9UBR5 152 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 CLN8Q9UBY8 286 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 LRRC42Q9Y546 428 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 NF1P21359 2839 aa12□□□□□ -0.49
HLA-F-229ENST00000489502 IGKV1D-17A0A075B6S4 117 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 FOXH1O75593 365 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 ALX3O95076 343 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 PSG2P11465 335 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 MAPK3P27361 379 aaPredicted RBP11.99□□□□□ -0.49
HLA-F-229ENST00000489502 BDKRB2P30411 391 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 GABRA2P47869 451 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 OR3A4PP47883 348 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 DVL1P1P54792 670 aaPredicted RBP11.99□□□□□ -0.49
HLA-F-229ENST00000489502 SNU13P55769 128 aaKnown RBP11.99□□□□□ -0.49
HLA-F-229ENST00000489502 ZP1P60852 638 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 ERVK11-1P61568 191 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 PDZK1IP1Q13113 114 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 IKZF1Q13422 519 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 ACSM3Q53FZ2 586 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 ARMCX4Q5H9R4 360 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 UBE2UQ5VVX9 321 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 WDR25Q64LD2 544 aaPredicted RBP11.99□□□□□ -0.49
HLA-F-229ENST00000489502 ZNF841Q6ZN19 808 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 IL17RELQ6ZVW7 336 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 TNFAIP8L1Q8WVP5 186 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 GPER1Q99527 375 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 HES4Q9HCC6 221 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 TMEM138Q9NPI0 162 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 OR14J1Q9UGF5 321 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 OR5V1Q9UGF6 321 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 ZNF222Q9UK12 451 aa11.99□□□□□ -0.49
HLA-F-229ENST00000489502 TRAV20A0A0B4J274 112 aa11.98□□□□□ -0.49
HLA-F-229ENST00000489502 C22orf46C9J442 243 aa11.98□□□□□ -0.49
HLA-F-229ENST00000489502 TRAPPC2LH3BP13 241 aa11.98□□□□□ -0.49
HLA-F-229ENST00000489502 DVL1O14640 695 aa11.98□□□□□ -0.49
HLA-F-229ENST00000489502 MAGEB3O15480 346 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms