RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PAHP00439 452 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 ALPLP05186 524 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 ACSM1Q08AH1 577 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 TP53I3Q53FA7 332 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 HCP5Q6MZN7 132 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 FAM220AQ7Z4H9 259 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 OR5D13Q8NGL4 314 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 PKIBQ9C010 78 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 ORC6Q9Y5N6 252 aa18.8■□□□□ 0.6
COL9A3-213ENST00000489045 DSCAML1Q8TD84 2053 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 BTBD17A6NE02 478 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 H3BNX3 289 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 KIR3DL2P43630 455 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 ISL1P61371 349 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 ERVK11-1P61568 191 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 RPL31P62899 125 aaKnown RBP18.79■□□□□ 0.6
COL9A3-213ENST00000489045 IL24Q13007 206 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 KPNB1Q14974 876 aaKnown RBP18.79■□□□□ 0.6
COL9A3-213ENST00000489045 UBE2V2Q15819 145 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 TRUB1Q8WWH5 349 aaKnown RBP18.79■□□□□ 0.6
COL9A3-213ENST00000489045 HRASLS5Q96KN8 279 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 ADI1Q9BV57 179 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 USE1Q9NZ43 259 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 VPREB3Q9UKI3 123 aa18.79■□□□□ 0.6
COL9A3-213ENST00000489045 LOC107986453A0A1B0GWG9 222 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 ANGPTL7O43827 346 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 ENTPD6O75354 484 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 ZIK1Q3SY52 487 aaPredicted RBP18.78■□□□□ 0.6
COL9A3-213ENST00000489045 TMEM200BQ69YZ2 307 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 MKXQ8IYA7 352 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 CCDC54Q8NEL0 328 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 OR4M1Q8NGD0 313 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 LINC01006Q8NI28 216 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 CHST5Q9GZS9 411 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 SF3B6Q9Y3B4 125 aaKnown RBP18.78■□□□□ 0.6
COL9A3-213ENST00000489045 RNF114Q9Y508 228 aa18.78■□□□□ 0.6
COL9A3-213ENST00000489045 IGKV1-27A0A075B6S5 117 aa18.77■□□□□ 0.6
COL9A3-213ENST00000489045 GATBO75879 557 aaKnown RBP18.77■□□□□ 0.6
COL9A3-213ENST00000489045 TK1P04183 234 aa18.77■□□□□ 0.6
COL9A3-213ENST00000489045 UBCP0CG48 685 aaKnown RBP18.77■□□□□ 0.6
COL9A3-213ENST00000489045 BRICD5Q6PL45 260 aa18.77■□□□□ 0.6
COL9A3-213ENST00000489045 TREML4Q6UXN2 200 aa18.77■□□□□ 0.6
COL9A3-213ENST00000489045 RNF166Q96A37 237 aaPredicted RBP18.77■□□□□ 0.6
COL9A3-213ENST00000489045 RNFT2Q96EX2 444 aa18.77■□□□□ 0.6
COL9A3-213ENST00000489045 A0A1W2PPH5 198 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 ALDH3A2P51648 485 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 FUT6P51993 359 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 KRTAP10-3P60369 221 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 ACTC1P68032 377 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 ACTA1P68133 377 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 MIDNQ504T8 468 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 DHRS7BQ6IAN0 325 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-213ENST00000489045 ZFP1Q6P2D0 407 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 Q6ZSV7 163 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 CCDC121Q6ZUS5 278 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 RDH10Q8IZV5 341 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 ZSCAN4Q8NAM6 433 aaPredicted RBP18.76■□□□□ 0.59
COL9A3-213ENST00000489045 BEND2Q8NDZ0 799 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 OR5R1Q8NH85 324 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 C17orf50Q8WW18 174 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 SLAMF9Q96A28 289 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 CEP19Q96LK0 163 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 CITED1Q99966 193 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 MTCH1Q9NZJ7 389 aa18.76■□□□□ 0.59
COL9A3-213ENST00000489045 E9PQ18 207 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 F8VVB4 439 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 F8VWA3 439 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 J3QRE1 110 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 INMTO95050 263 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 SERPINA3P01011 423 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 CCL3L1P16619 93 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 SNRPGP62308 76 aaKnown RBP18.75■□□□□ 0.59
COL9A3-213ENST00000489045 COL10A1Q03692 680 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 ZNF273Q14593 569 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 SLC25A30Q5SVS4 291 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 C11orf42Q8N5U0 333 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 ASCC1Q8N9N2 400 aaKnown RBP18.75■□□□□ 0.59
COL9A3-213ENST00000489045 OR2G2Q8NGZ5 317 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 C10orf35Q96D05 121 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 BORCS8Q96FH0 119 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 FAM234AQ9H0X4 552 aa18.75■□□□□ 0.59
COL9A3-213ENST00000489045 DAPL1A0PJW8 107 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 PIPP12273 146 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-213ENST00000489045 PROK1P58294 105 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 ERVFRD-1P60508 538 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 CNN3Q15417 329 aaKnown RBP18.74■□□□□ 0.59
COL9A3-213ENST00000489045 OCLNQ16625 522 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 MEDAGQ5VYS4 303 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 SLC25A26Q70HW3 274 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 CBR4Q8N4T8 237 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 PP6455Q8WZ26 134 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 ADAT3Q96EY9 351 aaPredicted RBP18.74■□□□□ 0.59
COL9A3-213ENST00000489045 AJUBAQ96IF1 538 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 MBOAT4Q96T53 435 aa18.74■□□□□ 0.59
COL9A3-213ENST00000489045 VWFP04275 2813 aa18.73■□□□□ 0.59
COL9A3-213ENST00000489045 H3BUX3 64 aa18.73■□□□□ 0.59
COL9A3-213ENST00000489045 K7N7A8 449 aa18.73■□□□□ 0.59
COL9A3-213ENST00000489045 OR12D2P58182 307 aa18.73■□□□□ 0.59
COL9A3-213ENST00000489045 TMEM244Q5VVB8 128 aa18.73■□□□□ 0.59
COL9A3-213ENST00000489045 HEXA-AS1Q9H8Q6 139 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms