RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 FBLN7Q53RD9 439 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF322Q6U7Q0 402 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-231ENST00000488905 ASRGL1Q7L266 308 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 CALHM1Q8IU99 346 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 DYNAPQ8N1N2 210 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 FOXRED1Q96CU9 486 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-231ENST00000488905 PAPOLBQ9NRJ5 636 aaKnown RBP14.9□□□□□ -0.02
HDAC6-231ENST00000488905 SERTAD4Q9NUC0 356 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 DNAJB9Q9UBS3 223 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 TCF19Q9Y242 345 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 TBL2Q9Y4P3 447 aaKnown RBP14.9□□□□□ -0.02
HDAC6-231ENST00000488905 R4GMQ9 66 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 DHRS7CA6NNS2 312 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 C17orf98A8MV24 154 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 ODF3BA8MYP8 253 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 PRKYO43930 277 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 FKBP6O75344 327 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 FBXO24O75426 580 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 PRB2P02812 416 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-231ENST00000488905 CRISP1P54107 249 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 DLX6P56179 175 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 FLOT2Q14254 428 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 HABP2Q14520 560 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-231ENST00000488905 FAM189A2Q15884 450 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 SPATA24Q86W54 205 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 ELMOD2Q8IZ81 293 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 LYG1Q8N1E2 194 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 Q8N2B8 174 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 ASCC1Q8N9N2 400 aaKnown RBP14.89□□□□□ -0.03
HDAC6-231ENST00000488905 CCDC197Q8NCU1 140 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 OR14K1Q8NGZ2 314 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 PRRG3Q9BZD7 231 aa14.89□□□□□ -0.03
HDAC6-231ENST00000488905 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.89□□□□□ -0.03
HDAC6-231ENST00000488905 A0A1B0GTI1 187 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 K7N7A8 449 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 RBP4P02753 201 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 ARG1P05089 322 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 ERVK11-1P61568 191 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 Q6ZPA2 131 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 PLEKHG7Q6ZR37 379 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 REC114Q7Z4M0 266 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 SLC35F2Q8IXU6 374 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 OR13D1Q8NGV5 346 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 RPS4Y2Q8TD47 263 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 APOL4Q9BPW4 351 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 CDCA4Q9BXL8 241 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 PKIBQ9C010 78 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 OR52A1Q9UKL2 312 aa14.88□□□□□ -0.03
HDAC6-231ENST00000488905 A6NIN4 97 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 M0R129 80 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 PIN1P1O15428 100 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 MAGEB4O15481 346 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-231ENST00000488905 FAM107AO95990 144 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 ACTR3P61158 418 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 COL10A1Q03692 680 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 IL24Q13007 206 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 PTGES3Q15185 160 aaKnown RBP14.87□□□□□ -0.03
HDAC6-231ENST00000488905 CNN3Q15417 329 aaKnown RBP14.87□□□□□ -0.03
HDAC6-231ENST00000488905 NSUN5P1Q3KNT7 163 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 ZNF626Q68DY1 528 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 FAHD1Q6P587 224 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 CCBE1Q6UXH8 406 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-231ENST00000488905 Q6ZSR3 168 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 BCDIN3DQ7Z5W3 292 aaKnown RBP14.87□□□□□ -0.03
HDAC6-231ENST00000488905 TMEM219Q86XT9 240 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 OR4S1Q8NGB4 309 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 NRBF2Q96F24 287 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 MNTQ99583 582 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 ADGRL4Q9HBW9 690 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 ABCB10Q9NRK6 738 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 PITPNC1Q9UKF7 332 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 SLC22A13Q9Y226 551 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 SNX5Q9Y5X3 404 aa14.87□□□□□ -0.03
HDAC6-231ENST00000488905 KIAA2026Q5HYC2 2103 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 TCRBV3S1A0A5B6 114 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 MEX3AA1L020 520 aaKnown RBP14.86□□□□□ -0.03
HDAC6-231ENST00000488905 A6NDX4 124 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 ZNF670-ZNF695F2Z2N8 137 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 ZNF737O75373 536 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 ZNF728P0DKX0 622 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 CD28P10747 220 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 CCL1P22362 96 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 RAB13P51153 203 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 DAPP51397 102 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 EDDM3BP56851 147 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 LDLRAD2Q5SZI1 272 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 MEPCEQ7L2J0 689 aaKnown RBP14.86□□□□□ -0.03
HDAC6-231ENST00000488905 ANGPTL5Q86XS5 388 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 TRMT10AQ8TBZ6 339 aaKnown RBP14.86□□□□□ -0.03
HDAC6-231ENST00000488905 WIPF2Q8TF74 440 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-231ENST00000488905 MALSU1Q96EH3 234 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 PLEKHA1Q9HB21 404 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 CLN6Q9NWW5 311 aa14.86□□□□□ -0.03
HDAC6-231ENST00000488905 MRM2Q9UI43 246 aaKnown RBP14.86□□□□□ -0.03
HDAC6-231ENST00000488905 XPNPEP2O43895 674 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 IGHV1-8P0DP01 117 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 SSX2Q16385 188 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 NXNL2Q5VZ03 156 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 GDPD3Q7L5L3 318 aa14.85□□□□□ -0.03
HDAC6-231ENST00000488905 TCF23Q7RTU1 214 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms