RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 SLC1A7O00341 560 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 CEBPDP49716 269 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-209ENST00000487617 PRB3Q04118 309 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-209ENST00000487617 GALEQ14376 348 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 CNN3Q15417 329 aaKnown RBP16.8■□□□□ 0.28
HDAC4-209ENST00000487617 Q6YL49 198 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 ZNF561Q8N587 486 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 Q8N7P7 452 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 ADAT3Q96EY9 351 aaPredicted RBP16.8■□□□□ 0.28
HDAC4-209ENST00000487617 BORCS8Q96FH0 119 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 RDH12Q96NR8 316 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 ALG8Q9BVK2 526 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 HES4Q9HCC6 221 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 OR14J1Q9UGF5 321 aa16.8■□□□□ 0.28
HDAC4-209ENST00000487617 IGKV1-27A0A075B6S5 117 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 TRBV23-1A0A0A0MS06 115 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 ISG15P05161 165 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 ZNF20P17024 532 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 CCR9P51686 369 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 RAB40BQ12829 278 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 FOXL1Q12952 345 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 BLMHQ13867 455 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 C16orf87Q6PH81 154 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 METAP1DQ6UB28 335 aaPredicted RBP16.79■□□□□ 0.28
HDAC4-209ENST00000487617 FAM185AQ8N0U4 392 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 FGGYQ96C11 551 aa16.79■□□□□ 0.28
HDAC4-209ENST00000487617 RPL36Q9Y3U8 105 aaKnown RBP16.79■□□□□ 0.28
HDAC4-209ENST00000487617 A0A0U1RQK1 487 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 M0R1W7 72 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 INMTO95050 263 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 KNG1P01042 644 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 IGHA1P01876 353 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 MELTFP08582 738 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 DLX1P56177 255 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 ERVK11-1P61568 191 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 GUCA2AQ02747 115 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 ALKBH1Q13686 389 aaKnown RBP16.78■□□□□ 0.28
HDAC4-209ENST00000487617 LRRC36Q1X8D7 754 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 C1orf122Q6ZSJ8 110 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 SYS1Q8N2H4 156 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 ZNF676Q8N7Q3 588 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 OR52I1Q8NGK6 324 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 APH1BQ8WW43 257 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 SLAMF9Q96A28 289 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 CEP19Q96LK0 163 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 ISG20L2Q9H9L3 353 aaKnown RBP16.78■□□□□ 0.28
HDAC4-209ENST00000487617 INPP5EQ9NRR6 644 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 ERVK13-1Q9NX77 482 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 MTCH1Q9NZJ7 389 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 HHLA2Q9UM44 414 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 FBN3Q75N90 2809 aa16.78■□□□□ 0.28
HDAC4-209ENST00000487617 OR4C45A6NMZ5 311 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 RNASEK-C17orf49H0YIS7 233 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 ATF1P18846 271 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 EEF1B2P24534 225 aaKnown RBP16.77■□□□□ 0.28
HDAC4-209ENST00000487617 RBP2P50120 134 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 KLRD1Q13241 179 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 SLC25A26Q70HW3 274 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 UTS2BQ765I0 119 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 PIP4P2Q8N4L2 257 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 DNAAF1Q8NEP3 725 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 OR13C3Q8NGS6 347 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 OR10AC1Q8NH08 325 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 METTL8Q9H825 291 aaKnown RBP16.77■□□□□ 0.28
HDAC4-209ENST00000487617 C19orf12Q9NSK7 152 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 MRPS18AQ9NVS2 196 aaKnown RBP16.77■□□□□ 0.28
HDAC4-209ENST00000487617 FAM96BQ9Y3D0 163 aa16.77■□□□□ 0.28
HDAC4-209ENST00000487617 IGKV1-9A0A0C4DH69 117 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 A0A1W2PRD5 423 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 A0A1W2PRF3 423 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 A0A1W2PRM7 423 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 F8VVB4 439 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 F8VWA3 439 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 H0YAE9 185 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 OCM2P0CE71 109 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 OCMP0CE72 109 aaPredicted RBP16.76■□□□□ 0.27
HDAC4-209ENST00000487617 PRKACBP22694 351 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 ATP1B3P54709 279 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 RPL31P62899 125 aaKnown RBP16.76■□□□□ 0.27
HDAC4-209ENST00000487617 RCN1Q15293 331 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 KLHL22Q53GT1 634 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 LPCAT4Q643R3 524 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 EGFL6Q8IUX8 553 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 TMEM86BQ8N661 226 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 OR51A4Q8NGJ6 313 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 SSMEM1Q8WWF3 244 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 TNFRSF14Q92956 283 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 ZNF649Q9BS31 505 aa16.76■□□□□ 0.27
HDAC4-209ENST00000487617 WBP4O75554 376 aaKnown RBP16.75■□□□□ 0.27
HDAC4-209ENST00000487617 TK1P04183 234 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 AZGP1P25311 298 aaKnown RBP16.75■□□□□ 0.27
HDAC4-209ENST00000487617 POU3F4P49335 361 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 MTCP1P56278 107 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 COL10A1Q03692 680 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 MRPL28Q13084 256 aaKnown RBP16.75■□□□□ 0.27
HDAC4-209ENST00000487617 SMN1Q16637 294 aaKnown RBP16.75■□□□□ 0.27
HDAC4-209ENST00000487617 NCR3LG1Q68D85 454 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 LHFPL2Q6ZUX7 228 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 OR4M1Q8NGD0 313 aa16.75■□□□□ 0.27
HDAC4-209ENST00000487617 TBC1D15Q8TC07 691 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms