RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 RPS19P39019 145 aaKnown RBP9.36□□□□□ -0.91
TRIM56-204ENST00000487252 THBS3P49746 956 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 ERVK-25P63136 954 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 OR2G6Q5TZ20 316 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 FAM27BQ5VT28 67 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 SFRP4Q6FHJ7 346 aaPredicted RBP9.36□□□□□ -0.91
TRIM56-204ENST00000487252 SMARCD3Q6STE5 483 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 ZNF554Q86TJ5 538 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 CPOQ8IVL8 374 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 OR5AS1Q8N127 324 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 FGFRL1Q8N441 504 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 BBS1Q8NFJ9 593 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 OR52L1Q8NGH7 329 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 OR13C2Q8NGS9 318 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 OR5J2Q8NH18 312 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 DNAJA4Q8WW22 397 aaPredicted RBP9.36□□□□□ -0.91
TRIM56-204ENST00000487252 COQ7Q99807 217 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 TXNL4BQ9NX01 149 aaKnown RBP9.36□□□□□ -0.91
TRIM56-204ENST00000487252 ERVK13-1Q9NX77 482 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 HIF3AQ9Y2N7 669 aa9.36□□□□□ -0.91
TRIM56-204ENST00000487252 PNMA8CA0A1B0GUJ8 204 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 FUOMA2VDF0 154 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 CCDC182A6NF36 153 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 CENPBD1B2RD01 187 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 LOC110117498-PIK3R3F6TDL0 507 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 F2RL2O00254 374 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 CH25HO95992 272 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 MT-ATP6P00846 226 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 TSPAN19P0C672 248 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 SLC2A5P22732 501 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 PAX6P26367 422 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 S100A5P33763 92 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 RORCP51449 518 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 BCAP31P51572 246 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 GPR50Q13585 617 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 MELKQ14680 651 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 TRIM16LQ309B1 348 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 ALG10BQ5I7T1 473 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 LIPKQ5VXJ0 399 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 NCR3LG1Q68D85 454 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 ULK3Q6PHR2 472 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 FBXW12Q6X9E4 464 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 PLEKHG7Q6ZR37 379 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 PARP16Q8N5Y8 322 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 OR11L1Q8NGX0 322 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 UFD1Q92890 307 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 BARHL1Q9BZE3 327 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 TRIM36Q9NQ86 728 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 HAO2Q9NYQ3 351 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 H2AFY2Q9P0M6 372 aaPredicted RBP9.35□□□□□ -0.91
TRIM56-204ENST00000487252 DNAJB11Q9UBS4 358 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 DAPK2Q9UIK4 370 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 TIMM10BQ9Y5J6 103 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 SMAD5-AS1Q9Y6J3 95 aa9.35□□□□□ -0.91
TRIM56-204ENST00000487252 KMT2AQ03164 3969 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 TRAV38-1A0A0B4J264 116 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 A0A1B0GW55 424 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 CST2P09228 141 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 DUX4L2P0CJ85 424 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 DUX4L3P0CJ86 424 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 DUX4L5P0CJ88 424 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 DUX4L6P0CJ89 424 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 DUX4L7P0CJ90 424 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 COX5BP10606 129 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 FUT1P19526 365 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 SLC6A6P31641 620 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 CD200P41217 278 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 VDAC2P45880 294 aaPredicted RBP9.34□□□□□ -0.91
TRIM56-204ENST00000487252 HTR5AP47898 357 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 SLC9A3P48764 834 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 RPS25P62851 125 aaKnown RBP9.34□□□□□ -0.91
TRIM56-204ENST00000487252 BLCAPP62952 87 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 MPPED2Q15777 294 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 OR2T2Q6IF00 324 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 PLBD1Q6P4A8 553 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 DUX4L9Q6RFH8 374 aaPredicted RBP9.34□□□□□ -0.91
TRIM56-204ENST00000487252 ZNF322Q6U7Q0 402 aaPredicted RBP9.34□□□□□ -0.91
TRIM56-204ENST00000487252 FAM90A1Q86YD7 464 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 LYSMD2Q8IV50 215 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 NOXO1Q8NFA2 376 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 ST8SIA4Q92187 359 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 SLC25A46Q96AG3 418 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 IFT27Q9BW83 186 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 C6orf62Q9GZU0 229 aaPredicted RBP9.34□□□□□ -0.91
TRIM56-204ENST00000487252 NUAK2Q9H093 628 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 ZMAT4Q9H898 229 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 SP140LQ9H930 580 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 EXOSC4Q9NPD3 245 aaKnown RBP9.34□□□□□ -0.91
TRIM56-204ENST00000487252 RNF7Q9UBF6 113 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 RPS6KB2Q9UBS0 482 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 DUX4Q9UBX2 424 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 TCF19Q9Y242 345 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 MUC4Q99102 2169 aa9.34□□□□□ -0.91
TRIM56-204ENST00000487252 TRBV23-1A0A0A0MS06 115 aa9.33□□□□□ -0.92
TRIM56-204ENST00000487252 IGKV1D-43A0A0B4J1Z2 117 aa9.33□□□□□ -0.92
TRIM56-204ENST00000487252 A6NDX4 124 aa9.33□□□□□ -0.92
TRIM56-204ENST00000487252 OOEPA6NGQ2 149 aa9.33□□□□□ -0.92
TRIM56-204ENST00000487252 RIIAD1A6NNX1 92 aa9.33□□□□□ -0.92
TRIM56-204ENST00000487252 IQCF6A8MYZ5 107 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms