RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 PGA5P0DJD9 388 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 PSG2P11465 335 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 MMP9P14780 707 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 GLRA1P23415 457 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 CPT2P23786 658 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 CAPGP40121 348 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 TGM4P49221 684 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 NPY4RP50391 375 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 GTF2A1P52655 376 aaPredicted RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 RAB40BQ12829 278 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 ALKBH1Q13686 389 aaKnown RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 OR2G6Q5TZ20 316 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 RUSC1-AS1Q66K80 236 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 BTNL3Q6UXE8 466 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 BRD3OSQ6XYD6 125 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 ACP7Q6ZNF0 438 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 ZNF788Q6ZQV5 615 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 SYS1Q8N2H4 156 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 DHRSXQ8N5I4 330 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 CD177Q8N6Q3 437 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 POC1AQ8NBT0 407 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 ZNRF1Q8ND25 227 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 TMEM158Q8WZ71 300 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 RGP1Q92546 391 aaPredicted RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 UPRTQ96BW1 309 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 FGGYQ96C11 551 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 C12orf43Q96C57 262 aaKnown RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 Q96MT0 163 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 ZNF48Q96MX3 618 aaPredicted RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 TBX15Q96SF7 602 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 PDCD1LG2Q9BQ51 273 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 NRIP2Q9BQI9 281 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 PCGF1Q9BSM1 259 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 C19orf24Q9BVV8 132 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 SIRPDQ9H106 197 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 TRIM36Q9NQ86 728 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 MRPS18AQ9NVS2 196 aaKnown RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 IL36RNQ9UBH0 155 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 RPUSD1Q9UJJ7 312 aaKnown RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 ZNF222Q9UK12 451 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 RPL36Q9Y3U8 105 aaKnown RBP5.91□□□□□ -1.46
UBE4B-209ENST00000487244 PCDHGB1Q9Y5G3 927 aa5.91□□□□□ -1.46
UBE4B-209ENST00000487244 KIAA2026Q5HYC2 2103 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 NKX6-3A6NJ46 265 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 RFPL4AA6NLU0 287 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ZNF879B4DU55 563 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 RFPL4AL1F8VTS6 287 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SIGLEC5O15389 551 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 XPNPEP2O43895 674 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 NXPH2O95156 264 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 LALBAP00709 142 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ISG15P05161 165 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ACAA1P09110 424 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 MPZP25189 248 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 GABRA2P47869 451 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 CCR9P51686 369 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 AQP4P55087 323 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 HILS1P60008 231 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ERVK11-1P61568 191 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 IL13RA1P78552 427 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ATPAF1Q5TC12 328 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 TTC23Q5W5X9 447 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ASPHD2Q6ICH7 369 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 CRIP3Q6Q6R5 217 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SLC25A26Q70HW3 274 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SLC36A1Q7Z2H8 476 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 KCTD20Q7Z5Y7 419 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ZNF573Q86YE8 665 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 WFDC3Q8IUB2 231 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 PDZD9Q8IXQ8 264 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 BPIFB2Q8N4F0 458 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ZNF676Q8N7Q3 588 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SIGLECL1Q8N7X8 197 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 OR13C3Q8NGS6 347 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 H1FXQ92522 213 aaKnown RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 ITFG2Q969R8 447 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SLAMF9Q96A28 289 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 RFT1Q96AA3 541 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 TMIGD2Q96BF3 282 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 C1orf147Q96MC9 270 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 DUX5Q96PT3 197 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SPACA5Q96QH8 159 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 NKX3-1Q99801 234 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 JAM3Q9BX67 310 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 DCLRE1BQ9H816 532 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 HES4Q9HCC6 221 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 FGF20Q9NP95 211 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 C8orf4Q9NR00 106 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 INPP5EQ9NRR6 644 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 MTCH1Q9NZJ7 389 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SLC25A10Q9UBX3 287 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 CLEC2DQ9UHP7 191 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 NUP50Q9UKX7 468 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 HHLA2Q9UM44 414 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 MAB21L2Q9Y586 359 aa5.9□□□□□ -1.46
UBE4B-209ENST00000487244 SIRT4Q9Y6E7 314 aaPredicted RBP5.9□□□□□ -1.46
UBE4B-209ENST00000487244 IGKV1-12A0A0C4DH73 117 aa5.89□□□□□ -1.47
UBE4B-209ENST00000487244 DNAJC9-AS1A6NH13 148 aa5.89□□□□□ -1.47
UBE4B-209ENST00000487244 H0YAE9 185 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms