RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 FHITP49789 147 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 ELLP55199 621 aaPredicted RBP6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 DEFB133Q30KQ1 61 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 ANKRD39Q53RE8 183 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TEX30Q5JUR7 227 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 COL13A1Q5TAT6 717 aaPredicted RBP6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 NCR3LG1Q68D85 454 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 LINC00114Q6XXX2 140 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TSTD1Q8NFU3 115 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 SVIPQ8NHG7 77 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 RNF133Q8WVZ7 376 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF775Q96BV0 537 aaPredicted RBP6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 RPUSD4Q96CM3 377 aaKnown RBP6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 SPSB2Q99619 263 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 SAMD10Q9BYL1 202 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 BARX1Q9HBU1 254 aaPredicted RBP6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TBX21Q9UL17 535 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TRBV11-1A0A0K0K1C0 115 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 HSPB6O14558 160 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TRGC2P03986 189 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 HLA-DOBP13765 273 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TMEM196Q5HYL7 178 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF684Q5T5D7 378 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 CLEC2AQ6UVW9 174 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 LYZL2Q7Z4W2 148 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 PRR18Q8N4B5 295 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 VPS25Q9BRG1 176 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 FAAP24Q9BTP7 215 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 PECRQ9BY49 303 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 OBP2AQ9NY56 170 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 SRPK3Q9UPE1 567 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 IGLV1-36A0A0B4J1U3 117 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TLCD2A6NGC4 264 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 M0R135 149 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF205O95201 554 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 GUSBP08236 651 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 FOLR2P14207 255 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 FCARP24071 287 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 PSMB3P49720 205 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 CD81P60033 236 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 NHLH2Q02577 135 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 CST9LP1Q5W188 147 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 BIVMQ86UB2 503 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 BATF2Q8N1L9 274 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 POC1AQ8NBT0 407 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 OR8B12Q8NGG6 310 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 TMEM37Q8WXS4 190 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 PP6455Q8WZ26 134 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 LHX4Q969G2 390 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF799Q96GE5 643 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 NUDT16L1Q9BRJ7 211 aaKnown RBP6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 SIRT7Q9NRC8 400 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 ANXA10Q9UJ72 324 aa6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 KLF2Q9Y5W3 355 aaPredicted RBP6.78□□□□□ -1.32
COL6A4P1-202ENST00000487147 HSD17B6O14756 317 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 KLK3P07288 261 aaPredicted RBP6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 FREM3P0C091 2139 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF708P17019 499 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF25P17030 456 aaPredicted RBP6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 MSR1P21757 451 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 C17orf78Q8N4C9 275 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 BADQ92934 168 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 GPR87Q9BY21 358 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 SMDT1Q9H4I9 107 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 TUBA4BQ9H853 241 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 TMEM100Q9NV29 134 aa6.77□□□□□ -1.32
COL6A4P1-202ENST00000487147 CABIN1Q9Y6J0 2220 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 CXorf65A6NEN9 183 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 CIDEAO60543 219 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 ISG15P05161 165 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 THBS4P35443 961 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 PPP1CCP36873 323 aaKnown RBP6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 HTR5AP47898 357 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 EGR4Q05215 589 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 C20orf196Q8IYI0 205 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 CCDC54Q8NEL0 328 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 OR51H1Q8NH63 302 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 RPH3ALQ9UNE2 315 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 PLXND1Q9Y4D7 1925 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 SPRY1O43609 319 aaPredicted RBP6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 OR2J2O76002 312 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 PDGFBP01127 241 aaPredicted RBP6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 DANCRP0C864 163 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 ATP6V0CP27449 155 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 RRADP55042 308 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 FOXF1Q12946 379 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 UNC119Q13432 240 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 BTNL8Q6UX41 500 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 LIAT1Q6ZQX7 453 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 LIN37Q96GY3 246 aaPredicted RBP6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 RNF150Q9ULK6 438 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 TIMM10BQ9Y5J6 103 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 XKRY2A2RUG3 117 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 GEMIN2O14893 280 aaKnown RBP6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 TRAPPC6AO75865 159 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 KLK2P20151 261 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 EWSR1Q01844 656 aaKnown RBP eCLIP6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 FZD2Q14332 565 aa6.77□□□□□ -1.33
COL6A4P1-202ENST00000487147 IQCJQ1A5X6 159 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms