RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 MEX3AA1L020 520 aaKnown RBP15.57■□□□□ 0.08
COL27A1-205ENST00000485397 M0R129 80 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 DLGAP1O14490 977 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 FAM107AO95990 144 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 PRB2P02812 416 aaPredicted RBP15.57■□□□□ 0.08
COL27A1-205ENST00000485397 HOXB6P17509 224 aaKnown RBP15.57■□□□□ 0.08
COL27A1-205ENST00000485397 RAB13P51153 203 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 DAPP51397 102 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 DLX6P56179 175 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 CXCR4P61073 352 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 FLOT2Q14254 428 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 PTGES3Q15185 160 aaKnown RBP15.57■□□□□ 0.08
COL27A1-205ENST00000485397 SAMD5Q5TGI4 173 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 ANGPTL5Q86XS5 388 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 CALHM1Q8IU99 346 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 SLC35F2Q8IXU6 374 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 HES4Q9HCC6 221 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 POLDIP2Q9Y2S7 368 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 R4GMQ9 66 aa15.57■□□□□ 0.08
COL27A1-205ENST00000485397 TCRBV3S1A0A5B6 114 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 FAM90A8PA6NJQ4 464 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 MPZP25189 248 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 HABP2Q14520 560 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-205ENST00000485397 BCL2L15Q5TBC7 163 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 FAHD1Q6P587 224 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 CCBE1Q6UXH8 406 aaPredicted RBP15.56■□□□□ 0.08
COL27A1-205ENST00000485397 LIAT1Q6ZQX7 453 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 MEPCEQ7L2J0 689 aaKnown RBP15.56■□□□□ 0.08
COL27A1-205ENST00000485397 MOB1AQ9H8S9 216 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 ZNF702PQ9H963 129 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 MRM2Q9UI43 246 aaKnown RBP15.56■□□□□ 0.08
COL27A1-205ENST00000485397 SLC22A13Q9Y226 551 aa15.56■□□□□ 0.08
COL27A1-205ENST00000485397 C17orf98A8MV24 154 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 MITFO75030 526 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-205ENST00000485397 ERVK11-1P61568 191 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 COL10A1Q03692 680 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 LDLRAD2Q5SZI1 272 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 KPRPQ5T749 579 aaPredicted RBP15.55■□□□□ 0.08
COL27A1-205ENST00000485397 AADACL4Q5VUY2 407 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 TCEANCQ8N8B7 351 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 TRMT10AQ8TBZ6 339 aaKnown RBP15.55■□□□□ 0.08
COL27A1-205ENST00000485397 DNAJC9Q8WXX5 260 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 NRBF2Q96F24 287 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 ADGRL4Q9HBW9 690 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 PLXNB1O43157 2135 aa15.55■□□□□ 0.08
COL27A1-205ENST00000485397 VGLL3A8MV65 326 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 ZNF670-ZNF695F2Z2N8 137 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 F8VVB4 439 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 F8VWA3 439 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 H3BSH0 61 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 K7N7A8 449 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 ARG1P05089 322 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 ACTR3P61158 418 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 FAM189A2Q15884 450 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 NSUN5P1Q3KNT7 163 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 Q6ZSR3 168 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 ASCC1Q8N9N2 400 aaKnown RBP15.54■□□□□ 0.08
COL27A1-205ENST00000485397 SERTAD4Q9NUC0 356 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 H2AFY2Q9P0M6 372 aaPredicted RBP15.54■□□□□ 0.08
COL27A1-205ENST00000485397 TCF19Q9Y242 345 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 SNX5Q9Y5X3 404 aa15.54■□□□□ 0.08
COL27A1-205ENST00000485397 FAM230AA0A1W2PPH8 454 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 A6NDX4 124 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 ODF3BA8MYP8 253 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 ZNF737O75373 536 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 INMTO95050 263 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 RPP14O95059 124 aaKnown RBP15.53■□□□□ 0.08
COL27A1-205ENST00000485397 CD28P10747 220 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 EPHA2P29317 976 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 EFNB1P98172 346 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 IL24Q13007 206 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 SSX2Q16385 188 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 ODF4Q2M2E3 257 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 SSX6Q7RTT6 188 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 TMEM219Q86XT9 240 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 UTP4Q969X6 686 aaKnown RBP15.53■□□□□ 0.08
COL27A1-205ENST00000485397 MNTQ99583 582 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 PKIBQ9C010 78 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 CLN6Q9NWW5 311 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 POMPQ9Y244 141 aa15.53■□□□□ 0.08
COL27A1-205ENST00000485397 TBL2Q9Y4P3 447 aaKnown RBP15.53■□□□□ 0.08
COL27A1-205ENST00000485397 GYG2O15488 501 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 FBXO24O75426 580 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 ZNF728P0DKX0 622 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 EDDM3BP56851 147 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 FBLN7Q53RD9 439 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 SLX4IPQ5VYV7 408 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 NXNL2Q5VZ03 156 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 Q8N2B8 174 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 DTX3Q8N9I9 347 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 OR13D1Q8NGV5 346 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 TMEM163Q8TC26 289 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 IL4I1Q96RQ9 567 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 TBX5Q99593 518 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 CADM1Q9BY67 442 aaKnown RBP15.52■□□□□ 0.08
COL27A1-205ENST00000485397 PRRG3Q9BZD7 231 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 ABCB10Q9NRK6 738 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 MTCH1Q9NZJ7 389 aa15.52■□□□□ 0.08
COL27A1-205ENST00000485397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL27A1-205ENST00000485397 IGKV1-27A0A075B6S5 117 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms