RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 SSX3Q99909 188 aa7.69□□□□□ -1.18
NUP50-215ENST00000484186 RBM4BQ9BQ04 359 aaKnown RBP7.69□□□□□ -1.18
NUP50-215ENST00000484186 NRIP2Q9BQI9 281 aa7.69□□□□□ -1.18
NUP50-215ENST00000484186 FAM234AQ9H0X4 552 aa7.69□□□□□ -1.18
NUP50-215ENST00000484186 MEGF9Q9H1U4 602 aa7.69□□□□□ -1.18
NUP50-215ENST00000484186 MMP27Q9H306 513 aa7.69□□□□□ -1.18
NUP50-215ENST00000484186 HES4Q9HCC6 221 aa7.69□□□□□ -1.18
NUP50-215ENST00000484186 TCF7L1Q9HCS4 588 aa7.69□□□□□ -1.18
NUP50-215ENST00000484186 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.69□□□□□ -1.18
NUP50-215ENST00000484186 hCG_1809904A0A1W2PP81 198 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 A0A1W2PPE2 198 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 A0A1W2PQL4 384 aaPredicted RBP7.68□□□□□ -1.18
NUP50-215ENST00000484186 A0A1W2PR64 198 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 A0A1W2PRV1 198 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 H3BUX3 64 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 SULT1C4O75897 302 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 TK1P04183 234 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 POLR2IP36954 125 aaKnown RBP7.68□□□□□ -1.18
NUP50-215ENST00000484186 ERVK11-1P61568 191 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 IL24Q13007 206 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 TMED1Q13445 227 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 ODF4Q2M2E3 257 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 SLC35E4Q6ICL7 350 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 CALHM1Q8IU99 346 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 BATF2Q8N1L9 274 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 CCDC54Q8NEL0 328 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 TRMT10AQ8TBZ6 339 aaKnown RBP7.68□□□□□ -1.18
NUP50-215ENST00000484186 RORBQ92753 470 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 AJUBAQ96IF1 538 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 ADI1Q9BV57 179 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 PKIBQ9C010 78 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 PPA2Q9H2U2 334 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 PLEKHA1Q9HB21 404 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 USE1Q9NZ43 259 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 FBLN5Q9UBX5 448 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 OR14J1Q9UGF5 321 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 SLC7A11Q9UPY5 501 aa7.68□□□□□ -1.18
NUP50-215ENST00000484186 MEGF8Q7Z7M0 2845 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 FAM230AA0A1W2PPH8 454 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 H3BSH0 61 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 K7N7A8 449 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 SYT7O43581 403 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 APOL3O95236 402 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 SERPINA3P01011 423 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 CHRM2P08172 466 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 CCL3L1P16619 93 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 ATP6V1E1P36543 226 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 FUT6P51993 359 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 LGALS4P56470 323 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 ERVFRD-1P60508 538 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 ZNF273Q14593 569 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 UBE2V2Q15819 145 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 LY6EQ16553 131 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 AANATQ16613 207 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 LRRC75BQ2VPJ9 315 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 PDLIM3Q53GG5 364 aaPredicted RBP7.67□□□□□ -1.18
NUP50-215ENST00000484186 OR10H4Q8NGA5 316 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 OR8J1Q8NGP2 316 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 RFKQ969G6 155 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 UBE2FQ969M7 185 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 EME1Q96AY2 570 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 C10orf35Q96D05 121 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 CENPNQ96H22 339 aaPredicted RBP7.67□□□□□ -1.18
NUP50-215ENST00000484186 OSBPL10Q9BXB5 764 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 GABARAPL3Q9BY60 117 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 RIBC2Q9H4K1 309 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 MTCH1Q9NZJ7 389 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 OAZ3Q9UMX2 235 aa7.67□□□□□ -1.18
NUP50-215ENST00000484186 IGKV1-27A0A075B6S5 117 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 C17orf98A8MV24 154 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 GATBO75879 557 aaKnown RBP7.66□□□□□ -1.18
NUP50-215ENST00000484186 PAX6P26367 422 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 GABRA5P31644 462 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 KIR2DS4P43632 304 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 BMXP51813 675 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 DLX6P56179 175 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 CDC42P60953 191 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 COL10A1Q03692 680 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 CRIP3Q6Q6R5 217 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 PRSS35Q8N3Z0 413 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 ASCC1Q8N9N2 400 aaKnown RBP7.66□□□□□ -1.18
NUP50-215ENST00000484186 PPP1R35Q8TAP8 253 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 BORCS8Q96FH0 119 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 CEP19Q96LK0 163 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 CHST5Q9GZS9 411 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 RAB18Q9NP72 206 aa7.66□□□□□ -1.18
NUP50-215ENST00000484186 LOC107986453A0A1B0GWG9 222 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 FAM90A8PA6NJQ4 464 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 SAC3D1A6NKF1 404 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 F8VVB4 439 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 F8VWA3 439 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 EBAG9O00559 213 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 ZNF737O75373 536 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 CIB2O75838 187 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 INMTO95050 263 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 UBCP0CG48 685 aaKnown RBP7.65□□□□□ -1.18
NUP50-215ENST00000484186 ZNF728P0DKX0 622 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 PIPP12273 146 aaPredicted RBP7.65□□□□□ -1.18
NUP50-215ENST00000484186 COX7A1P24310 79 aa7.65□□□□□ -1.18
NUP50-215ENST00000484186 KIR3DL2P43630 455 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms