RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SCN3BQ9NY72 215 aa8.29□□□□□ -1.08
CPSF4-213ENST00000484112 TRRAPQ9Y4A5 3859 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 TRAV40A0A0B4J280 105 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 FAM181BA6NEQ2 426 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 NKX6-3A6NJ46 265 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 C3orf80F5H4A9 247 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-213ENST00000484112 OGG1O15527 345 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 ZFPL1O95159 310 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 CD1AP06126 327 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 CD2P06729 351 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 PGA5P0DJD9 388 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 GLRA1P23415 457 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 HAAOP46952 286 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 RBP2P50120 134 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 ETV1P50549 477 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 ATP1B3P54709 279 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 BDH1Q02338 343 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 CDK5R1Q15078 307 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 ODF4Q2M2E3 257 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 SMIM21Q3B7S5 101 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 C6orf141Q5SZD1 244 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 WDR25Q64LD2 544 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-213ENST00000484112 SFRP4Q6FHJ7 346 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-213ENST00000484112 LAIR2Q6ISS4 152 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 HAGHLQ6PII5 290 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-213ENST00000484112 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 BRD3OSQ6XYD6 125 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 ZNF841Q6ZN19 808 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 LHFPL2Q6ZUX7 228 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 SERPINA12Q8IW75 414 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 Q8IYB0 196 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 PARP16Q8N5Y8 322 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 POC1AQ8NBT0 407 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 OR5D14Q8NGL3 314 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 OR13C3Q8NGS6 347 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 RAB40AQ8WXH6 277 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 THRSPQ92748 146 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 SMIM19Q96E16 107 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 BORCS8Q96FH0 119 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 MED30Q96HR3 178 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 FGF23Q9GZV9 251 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-213ENST00000484112 PPP1R3EQ9H7J1 279 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 SEBOXQ9HB31 216 aaPredicted RBP8.28□□□□□ -1.08
CPSF4-213ENST00000484112 BEX1Q9HBH7 125 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 GPR173Q9NS66 373 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 NLKQ9UBE8 527 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 DNAJB11Q9UBS4 358 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 RAB26Q9ULW5 256 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 ERGIC3Q9Y282 383 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 TPRKBQ9Y3C4 175 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 PCDHGB5Q9Y5G0 923 aa8.28□□□□□ -1.08
CPSF4-213ENST00000484112 IGHV2-70DA0A0C4DH43 119 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 KIR2DS1A0A191URI9 304 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 MYL12BO14950 172 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ADAM20O43506 726 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ENSAO43768 121 aaKnown RBP8.27□□□□□ -1.09
CPSF4-213ENST00000484112 CYB5AP00167 134 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ATF1P18846 271 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 VHLP40337 213 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 RAG2P55895 527 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 WNT4P56705 351 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 PAX2Q02962 417 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ACSM1Q08AH1 577 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 UBE2V2Q15819 145 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 DEFB112Q30KQ8 113 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 YIF1BQ5BJH7 314 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 LRRC10Q5BKY1 277 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 FAM201AQ5SY85 155 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 STUMQ69YW2 141 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 FIP1L1Q6UN15 594 aaKnown RBP8.27□□□□□ -1.09
CPSF4-213ENST00000484112 IZUMO2Q6UXV1 221 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ZNF788Q6ZQV5 615 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 C1QL4Q86Z23 238 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 MKXQ8IYA7 352 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 RDH10Q8IZV5 341 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 BOLLQ8N9W6 283 aaKnown RBP8.27□□□□□ -1.09
CPSF4-213ENST00000484112 PNLDC1Q8NA58 520 aaKnown RBP8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ZNF485Q8NCK3 441 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 BPIFB6Q8NFQ5 453 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 OR4F5Q8NH21 305 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ANGPTL6Q8NI99 470 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 GPR148Q8TDV2 347 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 WFDC12Q8WWY7 111 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 DACT3Q96B18 629 aaPredicted RBP8.27□□□□□ -1.09
CPSF4-213ENST00000484112 FGGYQ96C11 551 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 NRIP2Q9BQI9 281 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 MND1Q9BWT6 205 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 CDCA4Q9BXL8 241 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ZCCHC4Q9H5U6 513 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 HES4Q9HCC6 221 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 DHDHQ9UQ10 334 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 ZNF281Q9Y2X9 895 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 LRRC42Q9Y546 428 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 MMP24Q9Y5R2 645 aa8.27□□□□□ -1.09
CPSF4-213ENST00000484112 A0A1B0GUS0 222 aa8.26□□□□□ -1.09
CPSF4-213ENST00000484112 FAM230AA0A1W2PPH8 454 aa8.26□□□□□ -1.09
CPSF4-213ENST00000484112 OR2AT4A6NND4 320 aa8.26□□□□□ -1.09
CPSF4-213ENST00000484112 E9PI62 339 aa8.26□□□□□ -1.09
CPSF4-213ENST00000484112 M0QZ24 198 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms