RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 VCX3BQ9H321 246 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 BABAM2Q9NXR7 383 aa14.9□□□□□ -0.02
HDAC6-225ENST00000483506 RPUSD1Q9UJJ7 312 aaKnown RBP14.9□□□□□ -0.02
HDAC6-225ENST00000483506 TRBV2A0A0J9YWF9 115 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 ZNF879B4DU55 563 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 OGG1O15527 345 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 TCF21O43680 179 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 XPNPEP2O43895 674 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 MMP9P14780 707 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 AZGP1P25311 298 aaKnown RBP14.89□□□□□ -0.03
HDAC6-225ENST00000483506 RBP2P50120 134 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 ATP1B3P54709 279 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 CAV3P56539 151 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 LHFPL2Q6ZUX7 228 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 FGFRL1Q8N441 504 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 ST8SIA4Q92187 359 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 RGP1Q92546 391 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-225ENST00000483506 ZNF488Q96MN9 340 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 MDFIQ99750 246 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 NUP50Q9UKX7 468 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 MAB21L2Q9Y586 359 aa14.89□□□□□ -0.03
HDAC6-225ENST00000483506 H0YHG0 523 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 NXPH2O95156 264 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 LALBAP00709 142 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 SELLP14151 372 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 FGF12P61328 243 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 IKZF1Q13422 519 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 C9orf139Q6ZV77 190 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 SMIM19Q96E16 107 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 OPALINQ96PE5 141 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 DCTN5Q9BTE1 182 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 ZCCHC4Q9H5U6 513 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 CHCHD3Q9NX63 227 aaKnown RBP14.88□□□□□ -0.03
HDAC6-225ENST00000483506 MTCH1Q9NZJ7 389 aa14.88□□□□□ -0.03
HDAC6-225ENST00000483506 SLC25A10Q9UBX3 287 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-225ENST00000483506 SIRT4Q9Y6E7 314 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-225ENST00000483506 RFPL4AA6NLU0 287 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 RFPL4AL1F8VTS6 287 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 PLATP00750 562 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 TFF1P04155 84 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 MYF6P23409 242 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 C6orf141Q5SZD1 244 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 RNLSQ5VYX0 342 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 DMKNQ6E0U4 476 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-225ENST00000483506 ZNF529Q6P280 563 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 CRIP3Q6Q6R5 217 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 AHSA2Q719I0 299 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 SERPINA12Q8IW75 414 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 Q8IYB0 196 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 CD177Q8N6Q3 437 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 KIR3DL3Q8N743 410 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 BPIFB6Q8NFQ5 453 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 OR13C9Q8NGT0 318 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 GATAD2BQ8WXI9 593 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 TMEM158Q8WZ71 300 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 CEP19Q96LK0 163 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 ANKRD60Q9BZ19 345 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 SIRPDQ9H106 197 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 SEBOXQ9HB31 216 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-225ENST00000483506 DHDHQ9UQ10 334 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 KPTNQ9Y664 436 aa14.87□□□□□ -0.03
HDAC6-225ENST00000483506 KNG1P01042 644 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 IGHV4-38-2P0DP08 117 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 FPR2P25090 351 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 C21orf33P30042 268 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-225ENST00000483506 PRDX2P32119 198 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 GABRA2P47869 451 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 HSPA13P48723 471 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 MTCP1P56278 107 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 HILS1P60008 231 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 SLC25A26Q70HW3 274 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 STX19Q8N4C7 294 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 ZNF561Q8N587 486 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 OR5D14Q8NGL3 314 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 GPR148Q8TDV2 347 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 ZNF418Q8TF45 676 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-225ENST00000483506 TSEN15Q8WW01 171 aaKnown RBP14.86□□□□□ -0.03
HDAC6-225ENST00000483506 WDFY2Q96P53 400 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 TBX15Q96SF7 602 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 SUCNR1Q9BXA5 334 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 OCEL1Q9H607 264 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 CNTD2Q9H8S5 307 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 NEK6Q9HC98 313 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 DNHD1Q96M86 4753 aa14.86□□□□□ -0.03
HDAC6-225ENST00000483506 F8VVB4 439 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 F8VWA3 439 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 SLC1A7O00341 560 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 SULT1B1O43704 296 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 ATP6V1G2O95670 118 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 TAS2R43P59537 309 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 BPIFB3P59826 476 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 PDZK1IP1Q13113 114 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 ASPHD2Q6ICH7 369 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 MKXQ8IYA7 352 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 BPIFB2Q8N4F0 458 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 ZNRF1Q8ND25 227 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 SLAMF9Q96A28 289 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 PGLYRP3Q96LB9 341 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 SLC6A7Q99884 636 aa14.85□□□□□ -0.03
HDAC6-225ENST00000483506 ZNF69Q9UC07 566 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms