RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
CCM2-215ENST00000482714 TREM2Q9NZC2 230 aa12.89□□□□□ -0.35
CCM2-215ENST00000482714 IL36GQ9NZH8 169 aa12.89□□□□□ -0.35
CCM2-215ENST00000482714 MTCH1Q9NZJ7 389 aa12.89□□□□□ -0.35
CCM2-215ENST00000482714 WIPI2Q9Y4P8 454 aa12.89□□□□□ -0.35
CCM2-215ENST00000482714 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
CCM2-215ENST00000482714 OOEPA6NGQ2 149 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 CYB5R3P00387 301 aaPredicted RBP12.88□□□□□ -0.35
CCM2-215ENST00000482714 POU3F4P49335 361 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 CARTPTQ16568 116 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 ATPAF1Q5TC12 328 aaPredicted RBP12.88□□□□□ -0.35
CCM2-215ENST00000482714 GPR107Q5VW38 600 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 TGIF2LYQ8IUE0 185 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 SPICQ8N5J4 248 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 OR6M1Q8NGM8 313 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 SPACA5Q96QH8 159 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 METTL9Q9H1A3 318 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 CNTD2Q9H8S5 307 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 NDUFA13Q9P0J0 144 aa12.88□□□□□ -0.35
CCM2-215ENST00000482714 AK6Q9Y3D8 172 aaKnown RBP12.88□□□□□ -0.35
CCM2-215ENST00000482714 SLC17A2O00624 439 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 SLC22A1O15245 554 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 AKR7A2O43488 359 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 SYNGR1O43759 233 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 GABARAPO95166 117 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 IL1AP01583 271 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 HTR2CP28335 458 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 BLMHQ13867 455 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 SMIM21Q3B7S5 101 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 FAM166AQ6J272 317 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 FIP1L1Q6UN15 594 aaKnown RBP12.87□□□□□ -0.35
CCM2-215ENST00000482714 KRTAP1-3Q8IUG1 177 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 TBC1D15Q8TC07 691 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 RAB2BQ8WUD1 216 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 MRI1Q9BV20 369 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 SMURF1Q9HCE7 757 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 ING4Q9UNL4 249 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 TANC2Q9HCD6 1990 aa12.87□□□□□ -0.35
CCM2-215ENST00000482714 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 NOTOA8MTQ0 251 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 H3BUI4 141 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 TNFRSF13BO14836 293 aaPredicted RBP12.86□□□□□ -0.35
CCM2-215ENST00000482714 NXPH2O95156 264 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 BPNT1O95861 308 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 CSTBP04080 98 aaKnown RBP12.86□□□□□ -0.35
CCM2-215ENST00000482714 SDC2P34741 201 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 RSU1Q15404 277 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 CTF1Q16619 201 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 ZNF404Q494X3 552 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 ACP7Q6ZNF0 438 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 FAM58AQ8N1B3 248 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 RFT1Q96AA3 541 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 BPESC1Q9GZL8 116 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 DCAF16Q9NXF7 216 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 KAAG1Q9UBP8 84 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 MIOXQ9UGB7 285 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 GLS2Q9UI32 602 aa12.86□□□□□ -0.35
CCM2-215ENST00000482714 IGHV4-30-2A0A087WSY4 118 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 IGKV1-12A0A0C4DH73 117 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 IFITM5A6NNB3 132 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 SPRY1O43609 319 aaPredicted RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 KNG1P01042 644 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 IGKV1D-12P01611 117 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 HEXAP06865 529 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 LOXL1Q08397 574 aaPredicted RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 ZNF146Q15072 292 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 ZMYND11Q15326 602 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 FAM189A2Q15884 450 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 C11orf91Q3C1V1 193 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 SPIN3Q5JUX0 258 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 SPNS3Q6ZMD2 512 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 DCDC5Q6ZRR9 648 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 SLC16A12Q6ZSM3 486 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 RNF144BQ7Z419 303 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 C1QL2Q7Z5L3 287 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 CLVS1Q8IUQ0 354 aaPredicted RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 OR51T1Q8NGJ9 327 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 OR5D18Q8NGL1 313 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 SLAMF9Q96A28 289 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 PLGRKTQ9HBL7 147 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 HMG20AQ9NP66 347 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 NLKQ9UBE8 527 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 OR2AT4A6NND4 320 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 ZNF701M0R085 212 aaPredicted RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 AIPO00170 330 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 ANGPTL7O43827 346 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 CDRT1O95170 752 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 PLATP00750 562 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 GTF2F2P13984 249 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 USF1P22415 310 aaPredicted RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 OR3A4PP47883 348 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 FGF12P61328 243 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 DGUOKQ16854 277 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 NHLRC3Q5JS37 347 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 AWAT2Q6E213 333 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms