RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CLVS1Q8IUQ0 354 aaPredicted RBP11.11□□□□□ -0.63
HDAC1-208ENST00000482310 MKXQ8IYA7 352 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 NKAIN3Q8N8D7 197 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PNLDC1Q8NA58 520 aaKnown RBP11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PHYHIPQ92561 330 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 RAB1CQ92928 201 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 EMG1Q92979 244 aaKnown RBP11.11□□□□□ -0.63
HDAC1-208ENST00000482310 CPNE2Q96FN4 548 aaPredicted RBP11.11□□□□□ -0.63
HDAC1-208ENST00000482310 KCTD7Q96MP8 289 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 GFI1Q99684 422 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 GAL3ST1Q99999 423 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PKIBQ9C010 78 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 KCNK15Q9H427 330 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 CNTD2Q9H8S5 307 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PLGRKTQ9HBL7 147 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 RBFOX1Q9NWB1 397 aaKnown RBP11.11□□□□□ -0.63
HDAC1-208ENST00000482310 MTCH1Q9NZJ7 389 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 POLDIP2Q9Y2S7 368 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 PPIAL4AQ9Y536 164 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 ABCA2Q9BZC7 2435 aa11.11□□□□□ -0.63
HDAC1-208ENST00000482310 IGKV1-12A0A0C4DH73 117 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 HAX1O00165 279 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 SMAD7O15105 426 aaKnown RBP11.1□□□□□ -0.63
HDAC1-208ENST00000482310 ALX3O95076 343 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 HTR3BO95264 441 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 IGKV1D-12P01611 117 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 GYPAP02724 150 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 ALDOBP05062 364 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 CLEC2LP0C7M8 214 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 PGA5P0DJD9 388 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 SERPINA2P20848 420 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 NR4A2P43354 598 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 CEBPDP49716 269 aaPredicted RBP11.1□□□□□ -0.63
HDAC1-208ENST00000482310 DSCR9P59020 149 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 VBP1P61758 197 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 NCS1P62166 190 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 IL24Q13007 206 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 P2RY14Q15391 338 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 HES5Q5TA89 166 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 SHEQ5VZ18 495 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 GLT8D1Q68CQ7 371 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 METAP1DQ6UB28 335 aaPredicted RBP11.1□□□□□ -0.63
HDAC1-208ENST00000482310 POC1AQ8NBT0 407 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 OR4D6Q8NGJ1 314 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 CEP19Q96LK0 163 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 S100A13Q99584 98 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 IL36RNQ9UBH0 155 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 OR14J1Q9UGF5 321 aa11.1□□□□□ -0.63
HDAC1-208ENST00000482310 MRPS28Q9Y2Q9 187 aaKnown RBP11.1□□□□□ -0.63
HDAC1-208ENST00000482310 IGHV4-61A0A0C4DH41 118 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 CCDC160A6NGH7 325 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 SRRM5B3KS81 715 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.09□□□□□ -0.63
HDAC1-208ENST00000482310 IFNL4K9M1U5 179 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 IGHV2-70P01814 119 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 PRKACAP17612 351 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 RAB3BP20337 219 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 GALP22466 123 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 MPZP25189 248 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 GIFP27352 417 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 DUSP1P28562 367 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 FGF9P31371 208 aaPredicted RBP11.09□□□□□ -0.63
HDAC1-208ENST00000482310 SDC2P34741 201 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 PTGFRP43088 359 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 GABRA2P47869 451 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 SERPINB10P48595 397 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 CLDN12P56749 244 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 TMEM33P57088 247 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 RSU1Q15404 277 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 ZNF181Q2M3W8 571 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 SLC22A6Q4U2R8 563 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 GLIPR1L1Q6UWM5 242 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 DNM1P46Q6ZS02 220 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 OR10Z1Q8NGY1 313 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 PCDHB10Q9UN67 800 aa11.09□□□□□ -0.63
HDAC1-208ENST00000482310 A0A0B4J203 849 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 TRAV1-2A0A0B4J238 106 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 A0A1B0GW55 424 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 A0A1W2PP11 408 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 MEGF11A6BM72 1044 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 LGALS8O00214 317 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 NDUFS8O00217 210 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 PDCD5O14737 125 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 LHBP01229 141 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 SFTPBP07988 381 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DUX4L2P0CJ85 424 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DUX4L3P0CJ86 424 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DUX4L4P0CJ87 422 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DUX4L5P0CJ88 424 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DUX4L6P0CJ89 424 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 DUX4L7P0CJ90 424 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 SLC25A16P16260 332 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 IL2RGP31785 369 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 MDH2P40926 338 aaKnown RBP11.08□□□□□ -0.64
HDAC1-208ENST00000482310 PDCD1Q15116 288 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 RAB11BQ15907 218 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 MICBQ29980 383 aa11.08□□□□□ -0.64
HDAC1-208ENST00000482310 SMIM21Q3B7S5 101 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms