RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 FAM46BQ96A09 425 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 FAM3DQ96BQ1 224 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 FOXRED1Q96CU9 486 aaPredicted RBP7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 DIRC2Q96SL1 478 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 NRIP2Q9BQI9 281 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 NICN1Q9BSH3 213 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 PKIBQ9C010 78 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 MS4A5Q9H3V2 200 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 CSMD1Q96PZ7 3565 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 APCP25054 2843 aa7.55□□□□□ -1.2
NUDCD3-208ENST00000480209 A0A0A6YYD4 124 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 hCG_1807616A0A1W2PRN6 198 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 TMEM14DPA8MWL7 114 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 TPD52L2O43399 206 aaKnown RBP7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 CDC14BO60729 498 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 HPGDSO60760 199 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 KDM4BO94953 1096 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 ZNF205O95201 554 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 BPNT1O95861 308 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 IGHV4-39P01824 125 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 EIF4EP06730 217 aaKnown RBP7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 TNFSF4P23510 183 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 CEBPDP49716 269 aaPredicted RBP7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 GMFBP60983 142 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 DGUOKQ16854 277 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 PCGF3Q3KNV8 242 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 C2orf76Q3KRA6 126 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 PIGYQ3MUY2 71 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 SLC22A6Q4U2R8 563 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 LAX1Q8IWV1 398 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 SAXO1Q8IYX7 474 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 PNLDC1Q8NA58 520 aaKnown RBP7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 ZSCAN4Q8NAM6 433 aaPredicted RBP7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 PXT1Q8NFP0 134 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 MCFD2Q8NI22 146 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 TBC1D15Q8TC07 691 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 Q8TCH9 128 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 CEP19Q96LK0 163 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 GAL3ST1Q99999 423 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 WDR13Q9H1Z4 485 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 BANF2Q9H503 90 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 FN3KRPQ9HA64 309 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 HES4Q9HCC6 221 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 PTTG2Q9NZH5 202 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 IL36GQ9NZH8 169 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 ING4Q9UNL4 249 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 PLEKHA6Q9Y2H5 1048 aa7.54□□□□□ -1.2
NUDCD3-208ENST00000480209 IGHV3OR15-7A0A075B7D8 119 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 IGHV1-69-2A0A0G2JMI3 117 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 SRRM5B3KS81 715 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 CTDSP2O14595 271 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 CRTAPO75718 401 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 HTR3BO95264 441 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 LHBP01229 141 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 ARSBP15848 533 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 COL8A2P25067 703 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 PSMD7P51665 324 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 SNU13P55769 128 aaKnown RBP7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 MADCAM1Q13477 382 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 RSU1Q15404 277 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 MOGAT2Q3SYC2 334 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 ZNF404Q494X3 552 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 MKXQ8IYA7 352 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 SAMD12Q8N8I0 201 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 BOLLQ8N9W6 283 aaKnown RBP7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 OR51F2Q8NH61 342 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 ZNF671Q8TAW3 534 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 KCTD12Q96CX2 325 aaKnown RBP7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 CPNE2Q96FN4 548 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 Q96M66 194 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 EGLN1Q9GZT9 426 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 C6orf62Q9GZU0 229 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 LPAR5Q9H1C0 372 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 ELL3Q9HB65 397 aaPredicted RBP7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 DECR2Q9NUI1 292 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 TMEM106BQ9NUM4 274 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 ABRACLQ9P1F3 81 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 COMMD3Q9UBI1 195 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 FBLN5Q9UBX5 448 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 SPATA2Q9UM82 520 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 PPP1R3CQ9UQK1 317 aa7.53□□□□□ -1.2
NUDCD3-208ENST00000480209 TACC2O95359 2948 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 A0A075B6Q4 140 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 A0A1B0GW55 424 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 FOXI3A8MTJ6 420 aaPredicted RBP7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 TRAPPC2LH3BP13 241 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 TMEM178BH3BS89 294 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 NOS1APO75052 506 aaPredicted RBP7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 MPIG6BO95866 241 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 UBBP0CG47 229 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 DUX4L2P0CJ85 424 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 DUX4L3P0CJ86 424 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 DUX4L4P0CJ87 422 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 DUX4L5P0CJ88 424 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 DUX4L6P0CJ89 424 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 DUX4L7P0CJ90 424 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 MGMTP16455 207 aa7.52□□□□□ -1.21
NUDCD3-208ENST00000480209 PRKACAP17612 351 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms