RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 A0A087WW49 117 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 HTR3EA5X5Y0 456 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 OOSP1A8MZH6 123 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 BUB1B-PAK6H3BSN5 160 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 CDC42EP2O14613 210 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 SHBGP04278 402 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 RBMY1A1P0DJD3 496 aaKnown RBP9.03□□□□□ -0.96
USP11-208ENST00000480104 TROVE2P10155 538 aaKnown RBP eCLIP9.03□□□□□ -0.96
USP11-208ENST00000480104 IDO1P14902 403 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 RHCEP18577 417 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 PPIBP23284 216 aaKnown RBP9.03□□□□□ -0.96
USP11-208ENST00000480104 CBX1P83916 185 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 EIF2B1Q14232 305 aaKnown RBP9.03□□□□□ -0.96
USP11-208ENST00000480104 RBM39Q14498 530 aaKnown RBP9.03□□□□□ -0.96
USP11-208ENST00000480104 EDDM3AQ14507 147 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 HLA-DRB5Q30154 266 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 KRT71Q3SY84 523 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 LRIF1Q5T3J3 769 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 GDPD3Q7L5L3 318 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 ZDHHC21Q8IVQ6 265 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 FTMTQ8N4E7 242 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 C11orf65Q8NCR3 313 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 ZNF671Q8TAW3 534 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 AQP3Q92482 292 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 ZBTB9Q96C00 473 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 SORT1Q99523 831 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 NSRP1Q9H0G5 558 aaKnown RBP9.03□□□□□ -0.96
USP11-208ENST00000480104 ABCB9Q9NP78 766 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 ING3Q9NXR8 418 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 VAPAQ9P0L0 249 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 SH3GLB1Q9Y371 365 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 LINC00312Q9Y6C7 94 aa9.03□□□□□ -0.96
USP11-208ENST00000480104 hADV38S2A0JD32 116 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 SPAG7O75391 227 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 HLA-DQA2P01906 255 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 GPX2P18283 190 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 ACKR3P25106 362 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 GPR4P46093 362 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 CRYBA2P53672 197 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 ZP1P60852 638 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 ABCE1P61221 599 aaKnown RBP9.02□□□□□ -0.97
USP11-208ENST00000480104 MEF2CQ06413 473 aaPredicted RBP9.02□□□□□ -0.97
USP11-208ENST00000480104 RTN4RL2Q86UN3 420 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 BATF2Q8N1L9 274 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 TPRX1Q8N7U7 411 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 ZNF454Q8N9F8 522 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 POC1AQ8NBT0 407 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 TOMM40LQ969M1 308 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 CREB3L1Q96BA8 519 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 PKNOX2Q96KN3 472 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 ELOVL1Q9BW60 279 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 POLR2J2Q9GZM3 115 aaKnown RBP9.02□□□□□ -0.97
USP11-208ENST00000480104 POLR2J3Q9H1A7 115 aaKnown RBP9.02□□□□□ -0.97
USP11-208ENST00000480104 ZNF286AQ9HBT8 521 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 SRA1Q9HD15 236 aaKnown RBP9.02□□□□□ -0.97
USP11-208ENST00000480104 MRPL22Q9NWU5 206 aaKnown RBP9.02□□□□□ -0.97
USP11-208ENST00000480104 CHCHD3Q9NX63 227 aaKnown RBP9.02□□□□□ -0.97
USP11-208ENST00000480104 FAT1Q14517 4588 aa9.02□□□□□ -0.97
USP11-208ENST00000480104 TRBV5-3A0A0A0MS03 114 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 A0A1W2PPI3 338 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 NCBP2LA6PVI3 153 aaKnown RBP9.01□□□□□ -0.97
USP11-208ENST00000480104 ZNF732B4DXR9 585 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 ZNF737O75373 536 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 RGS11O94810 467 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 ANXA2P07355 339 aaKnown RBP9.01□□□□□ -0.97
USP11-208ENST00000480104 PSKH1P11801 424 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 GNG3P63215 75 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 TNFRSF9Q07011 255 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 ZBED5Q49AG3 693 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 HAGHLQ6PII5 290 aaPredicted RBP9.01□□□□□ -0.97
USP11-208ENST00000480104 LYPD4Q6UWN0 246 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 LYG2Q86SG7 212 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 TGIF2LXQ8IUE1 241 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 OR4C15Q8NGM1 316 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 SLC26A7Q8TE54 656 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 EPS8L3Q8TE67 593 aaKnown RBP9.01□□□□□ -0.97
USP11-208ENST00000480104 PIGCQ92535 297 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 RPEQ96AT9 228 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 HRASLS5Q96KN8 279 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 LRGUKQ96M69 825 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 HSPB9Q9BQS6 159 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 CHCHD6Q9BRQ6 235 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 NRIP3Q9NQ35 241 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 SDR39U1Q9NRG7 319 aaPredicted RBP9.01□□□□□ -0.97
USP11-208ENST00000480104 LIN7CQ9NUP9 197 aaKnown RBP9.01□□□□□ -0.97
USP11-208ENST00000480104 PNPOQ9NVS9 261 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 SLC22A13Q9Y226 551 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 IER3IP1Q9Y5U9 82 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 GMEB1Q9Y692 573 aa9.01□□□□□ -0.97
USP11-208ENST00000480104 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
USP11-208ENST00000480104 H0Y980 276 aa9□□□□□ -0.97
USP11-208ENST00000480104 NXPH2O95156 264 aa9□□□□□ -0.97
USP11-208ENST00000480104 CST4P01036 141 aa9□□□□□ -0.97
USP11-208ENST00000480104 CFL1P23528 166 aaKnown RBP9□□□□□ -0.97
USP11-208ENST00000480104 CX3CR1P49238 355 aa9□□□□□ -0.97
USP11-208ENST00000480104 PRKCDQ05655 676 aa9□□□□□ -0.97
USP11-208ENST00000480104 TAF13Q15543 124 aa9□□□□□ -0.97
USP11-208ENST00000480104 SNCBQ16143 134 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms