RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 MMP26Q9NRE1 261 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 INSIG2Q9Y5U4 225 aa17.05■□□□□ 0.32
VARS-224ENST00000479051 IGHV2-70DA0A0C4DH43 119 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 DVL1O14640 695 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 SULT1B1O43704 296 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 ENSAO43768 121 aaKnown RBP17.04■□□□□ 0.32
VARS-224ENST00000479051 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
VARS-224ENST00000479051 ECDO95905 644 aaPredicted RBP17.04■□□□□ 0.32
VARS-224ENST00000479051 IFNA2P01563 188 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 RAB3AP20336 220 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 CRHBPP24387 322 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 GABRA2P47869 451 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 POU3F4P49335 361 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 IL13RA1P78552 427 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 SLC25A26Q70HW3 274 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 Q8IYB0 196 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 ST8SIA4Q92187 359 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 RGP1Q92546 391 aaPredicted RBP17.04■□□□□ 0.32
VARS-224ENST00000479051 TMEM106AQ96A25 262 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 CEP19Q96LK0 163 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 ZNF488Q96MN9 340 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 NUDT16L1Q9BRJ7 211 aaKnown RBP17.04■□□□□ 0.32
VARS-224ENST00000479051 TMPRSS13Q9BYE2 586 aa17.04■□□□□ 0.32
VARS-224ENST00000479051 PAK1IP1Q9NWT1 392 aaPredicted RBP17.04■□□□□ 0.32
VARS-224ENST00000479051 IGKV1-27A0A075B6S5 117 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 PNMA8CA0A1B0GUJ8 204 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 GPR37O15354 613 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 CD1AP06126 327 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 PSG2P11465 335 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 CELP19835 753 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 EEF1B2P24534 225 aaKnown RBP17.03■□□□□ 0.32
VARS-224ENST00000479051 PPP3R1P63098 170 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 ACSM1Q08AH1 577 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 IKZF1Q13422 519 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 SPHARQ15513 63 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 FIP1L1Q6UN15 594 aaKnown RBP17.03■□□□□ 0.32
VARS-224ENST00000479051 ZNF788Q6ZQV5 615 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 FAM216BQ8N7L0 139 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 THRSPQ92748 146 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 SLAMF9Q96A28 289 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 RASSF4Q9H2L5 321 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 SMURF1Q9HCE7 757 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 CKLFQ9UBR5 152 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 AUP1Q9Y679 476 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 DOCK11Q5JSL3 2073 aa17.03■□□□□ 0.32
VARS-224ENST00000479051 WNK2Q9Y3S1 2297 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 KIR2DS1A0A191URI9 304 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 LIPFP07098 398 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 MED22Q15528 200 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 Q499Y3 187 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 PRSS48Q7RTY5 328 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 PNLDC1Q8NA58 520 aaKnown RBP17.02■□□□□ 0.32
VARS-224ENST00000479051 NANPQ8TBE9 248 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 PGLYRP3Q96LB9 341 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 HES4Q9HCC6 221 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 TAS2R4Q9NYW5 299 aa17.02■□□□□ 0.32
VARS-224ENST00000479051 RFPL4AA6NLU0 287 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 RFPL4AL1F8VTS6 287 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 SIGLEC5O15389 551 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 DENRO43583 198 aaKnown RBP17.01■□□□□ 0.31
VARS-224ENST00000479051 KNG1P01042 644 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 ERVK11-1P61568 191 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 PAX2Q02962 417 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 PDZK1IP1Q13113 114 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 C1QL2Q7Z5L3 287 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 SGCDQ92629 289 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 GAFA1Q96PS6 74 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 MTCH1Q9NZJ7 389 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 SLC25A10Q9UBX3 287 aaPredicted RBP17.01■□□□□ 0.31
VARS-224ENST00000479051 ARHGAP32A7KAX9 2087 aa17.01■□□□□ 0.31
VARS-224ENST00000479051 ZFHX3Q15911 3703 aa17■□□□□ 0.31
VARS-224ENST00000479051 IGKV1D-17A0A075B6S4 117 aa17■□□□□ 0.31
VARS-224ENST00000479051 TRBV5-5A0A0J9YX44 114 aa17■□□□□ 0.31
VARS-224ENST00000479051 C22orf46C9J442 243 aa17■□□□□ 0.31
VARS-224ENST00000479051 MAPK3P27361 379 aaPredicted RBP17■□□□□ 0.31
VARS-224ENST00000479051 PAX8Q06710 450 aa17■□□□□ 0.31
VARS-224ENST00000479051 IRF3Q14653 427 aa17■□□□□ 0.31
VARS-224ENST00000479051 KISS1Q15726 138 aa17■□□□□ 0.31
VARS-224ENST00000479051 ARMCX4Q5H9R4 360 aa17■□□□□ 0.31
VARS-224ENST00000479051 BTN2A1Q7KYR7 527 aa17■□□□□ 0.31
VARS-224ENST00000479051 BATF2Q8N1L9 274 aa17■□□□□ 0.31
VARS-224ENST00000479051 OR13C5Q8NGS8 318 aa17■□□□□ 0.31
VARS-224ENST00000479051 EMG1Q92979 244 aaKnown RBP17■□□□□ 0.31
VARS-224ENST00000479051 RFT1Q96AA3 541 aa17■□□□□ 0.31
VARS-224ENST00000479051 SDSLQ96GA7 329 aa17■□□□□ 0.31
VARS-224ENST00000479051 SPACA5Q96QH8 159 aa17■□□□□ 0.31
VARS-224ENST00000479051 GPER1Q99527 375 aa17■□□□□ 0.31
VARS-224ENST00000479051 OR14J1Q9UGF5 321 aa17■□□□□ 0.31
VARS-224ENST00000479051 ZNF222Q9UK12 451 aa17■□□□□ 0.31
VARS-224ENST00000479051 ANK3Q12955 4377 aaKnown RBP16.99■□□□□ 0.31
VARS-224ENST00000479051 A0A1B0GW55 424 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 SPRY1O43609 319 aaPredicted RBP16.99■□□□□ 0.31
VARS-224ENST00000479051 INMTO95050 263 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 AVPP01185 164 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 DUX4L2P0CJ85 424 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 DUX4L3P0CJ86 424 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 DUX4L4P0CJ87 422 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 DUX4L5P0CJ88 424 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 DUX4L6P0CJ89 424 aa16.99■□□□□ 0.31
VARS-224ENST00000479051 DUX4L7P0CJ90 424 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms