RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 GASTP01350 101 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 CD24P25063 80 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 EDDM3BP56851 147 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 RIPPLY1Q0D2K3 151 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 IL18R1Q13478 541 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 NKAPLQ5M9Q1 402 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 PLCXD3Q63HM9 321 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 OR2T33Q8NG76 320 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 BTBD10Q9BSF8 475 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 IL1RAPQ9NPH3 570 aa13.68□□□□□ -0.22
VIM-204ENST00000478746 FAM183AA6NL82 134 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 H0YHG0 523 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 GSC2O15499 205 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 RAMP3O60896 148 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 ZNF3P17036 446 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 HAAOP46952 286 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 HMGA2P52926 109 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 PSMA6P60900 246 aaKnown RBP13.67□□□□□ -0.22
VIM-204ENST00000478746 CASC10Q5T4H9 136 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 GDPD3Q7L5L3 318 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 ZNF573Q86YE8 665 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 ASCC1Q8N9N2 400 aaKnown RBP13.67□□□□□ -0.22
VIM-204ENST00000478746 OTOSQ8NHW6 89 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 ITFG2Q969R8 447 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 ZNF714Q96N38 554 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 SLC25A33Q9BSK2 321 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 NIPAL2Q9H841 368 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 VNN3Q9NY84 501 aa13.67□□□□□ -0.22
VIM-204ENST00000478746 LSM4Q9Y4Z0 139 aaKnown RBP13.67□□□□□ -0.22
VIM-204ENST00000478746 IGHV2-26A0A0B4J1V2 119 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 J3QT63 122 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 TNFRSF11BO00300 401 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 NRASP01111 189 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 ATP6V1B1P15313 513 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 HTR1DP28221 377 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 BRS3P32247 399 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 DOC2BQ14184 412 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 C9orf152Q5JTZ5 239 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 ZNF684Q5T5D7 378 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 COMMD2Q86X83 199 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 BATF2Q8N1L9 274 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 OSR2Q8N2R0 312 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 ZNF676Q8N7Q3 588 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 ZNF454Q8N9F8 522 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 MUC7Q8TAX7 377 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 ASCL2Q99929 193 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 NRIP2Q9BQI9 281 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 CMC2Q9NRP2 79 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 ARMC1Q9NVT9 282 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 SLC22A13Q9Y226 551 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 PIGLQ9Y2B2 252 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 POLDIP2Q9Y2S7 368 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 LYVE1Q9Y5Y7 322 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 DSCAML1Q8TD84 2053 aa13.66□□□□□ -0.22
VIM-204ENST00000478746 BIRC6Q9NR09 4857 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 SACSQ9NZJ4 4579 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 A0A0U1RQV5 110 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 PSMB11A5LHX3 300 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 SH2D7A6NKC9 451 aaPredicted RBP13.65□□□□□ -0.22
VIM-204ENST00000478746 DNAJC8O75937 253 aaPredicted RBP13.65□□□□□ -0.22
VIM-204ENST00000478746 SOX14O95416 240 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 HSD17B1P14061 328 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 PRDX6P30041 224 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 MYCNOSP40205 109 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 MEF2CQ06413 473 aaPredicted RBP13.65□□□□□ -0.22
VIM-204ENST00000478746 ZBTB49Q6ZSB9 765 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 RBM14Q96PK6 669 aaKnown RBP13.65□□□□□ -0.22
VIM-204ENST00000478746 CLEC7AQ9BXN2 247 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 OR51V1Q9H2C8 321 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 HES4Q9HCC6 221 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 ENPP5Q9UJA9 477 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 SESN1Q9Y6P5 492 aa13.65□□□□□ -0.22
VIM-204ENST00000478746 ACOD1A6NK06 481 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 ARPC2O15144 300 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 OR2F2O95006 317 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 CCNB2O95067 398 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 AMY1AP04745 511 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 AMY2AP04746 511 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 RPL23AP62750 156 aaKnown RBP13.64□□□□□ -0.23
VIM-204ENST00000478746 KCTD18Q6PI47 426 aaPredicted RBP13.64□□□□□ -0.23
VIM-204ENST00000478746 TRPM8Q7Z2W7 1104 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 KRT77Q7Z794 578 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 ZNF329Q86UD4 541 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 AQP11Q8NBQ7 271 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 TMEM133Q9H2Q1 129 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 DPM3Q9P2X0 92 aa13.64□□□□□ -0.23
VIM-204ENST00000478746 TMEM269A0A1B0GVZ9 245 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 hADV38S2A0JD32 116 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 NUDT19A8MXV4 375 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 SELENOFO60613 162 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 ZNF737O75373 536 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 ARHGDIBP52566 201 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 LCN1P1Q5VSP4 162 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 C8orf86Q6ZUL3 223 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 ASRGL1Q7L266 308 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 OR2W3Q7Z3T1 314 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 OR4P4Q8NGL7 312 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 OR51E1Q8TCB6 317 aa13.63□□□□□ -0.23
VIM-204ENST00000478746 GPR84Q9NQS5 396 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms