RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 KIAA1324LA8MWY0 1029 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OGG1O15527 345 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SPRY1O43609 319 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SULT1B1O43704 296 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 PGA5P0DJD9 388 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SELLP14151 372 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 MUC1P15941 1255 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ATF1P18846 271 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 PCMT1P22061 227 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 PRKACBP22694 351 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CFHR2P36980 270 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 MAP2K4P45985 399 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 GABRA2P47869 451 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ATP1B3P54709 279 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SMIM21Q3B7S5 101 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CHRFAM7AQ494W8 412 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 RBM48Q5RL73 367 aaKnown RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 STUMQ69YW2 141 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 DMKNQ6E0U4 476 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 LHFPL2Q6ZUX7 228 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SLC25A26Q70HW3 274 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SERPINA12Q8IW75 414 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 FGFRL1Q8N441 504 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR5D14Q8NGL3 314 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 RPS4Y2Q8TD47 263 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 ORAI1Q96D31 301 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 PGLYRP3Q96LB9 341 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR14A2Q96R54 314 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 NKX3-1Q99801 234 aaPredicted RBP5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CDCA4Q9BXL8 241 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 SMURF1Q9HCE7 757 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 MMP26Q9NRE1 261 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 TAS2R4Q9NYW5 299 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 NLKQ9UBE8 527 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 OR14J1Q9UGF5 321 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 CDC42EP3Q9UKI2 254 aa5.75□□□□□ -1.49
BRCA1-215ENST00000478531 COL6A5A8TX70 2615 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 A0A1W2PPK0 400 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 OR2AT4A6NND4 320 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 A8MXK9 166 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 TRAPPC2LH3BP13 241 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 DVL1O14640 695 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 NDUFA2O43678 99 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 CRLF1O75462 422 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 FSTL3O95633 263 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 CYB5AP00167 134 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 ADRA2CP18825 462 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 RAB3AP20336 220 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 MPZP25189 248 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 CEBPDP49716 269 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-215ENST00000478531 SNU13P55769 128 aaKnown RBP5.74□□□□□ -1.49
BRCA1-215ENST00000478531 PPP3R1P63098 170 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 IL24Q13007 206 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 SPHARQ15513 63 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 YIF1BQ5BJH7 314 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 WDR25Q64LD2 544 aaPredicted RBP5.74□□□□□ -1.49
BRCA1-215ENST00000478531 ACP7Q6ZNF0 438 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 PRSS48Q7RTY5 328 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 SLC36A1Q7Z2H8 476 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 RNF144BQ7Z419 303 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 SATL1Q86VE3 508 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 PARP16Q8N5Y8 322 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 POC1AQ8NBT0 407 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 DNAAF1Q8NEP3 725 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 OR51A2Q8NGJ7 313 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 SPSB1Q96BD6 273 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 C12orf43Q96C57 262 aaKnown RBP5.74□□□□□ -1.49
BRCA1-215ENST00000478531 CEP19Q96LK0 163 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 TMED9Q9BVK6 235 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 PKIBQ9C010 78 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 FAM192AQ9GZU8 254 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 DUSP21Q9H596 190 aa5.74□□□□□ -1.49
BRCA1-215ENST00000478531 LSM2Q9Y333 95 aaKnown RBP5.74□□□□□ -1.49
BRCA1-215ENST00000478531 IGKV1D-17A0A075B6S4 117 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 LOC105371242A0A075B767 164 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 RFPL4AA6NLU0 287 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 C22orf46C9J442 243 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 RFPL4AL1F8VTS6 287 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 F8VVB4 439 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 F8VWA3 439 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 MAGEB3O15480 346 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 DENRO43583 198 aaKnown RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 ANGPTL7O43827 346 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 CALCBP10092 127 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 PSG2P11465 335 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 SRD5A1P18405 259 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 BCL3P20749 454 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 SRP14P37108 136 aaKnown RBP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 CAPZA1P52907 286 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 RPS11P62280 158 aaKnown RBP eCLIP5.73□□□□□ -1.49
BRCA1-215ENST00000478531 IL13RA1P78552 427 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 IRF3Q14653 427 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 Q499Y3 187 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 LIPKQ5VXJ0 399 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 RNLSQ5VYX0 342 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF841Q6ZN19 808 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 IQCF2Q8IXL9 164 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 TMEM185AQ8NFB2 350 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 ANGPTL6Q8NI99 470 aa5.73□□□□□ -1.49
BRCA1-215ENST00000478531 H1FXQ92522 213 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms