RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 INMTO95050 263 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 NXPH2O95156 264 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 MMP9P14780 707 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 MYL12AP19105 171 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 FPR2P25090 351 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 AZGP1P25311 298 aaKnown RBP12.88□□□□□ -0.35
HMGA1-206ENST00000478214 CEBPDP49716 269 aaPredicted RBP12.88□□□□□ -0.35
HMGA1-206ENST00000478214 AQP4P55087 323 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 ERVK11-1P61568 191 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 ARF6P62330 175 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 ST3GAL4Q11206 333 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 TMPRSS11AQ6ZMR5 421 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 SLC25A26Q70HW3 274 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 PHC2Q8IXK0 858 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 CD177Q8N6Q3 437 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 ZNRF1Q8ND25 227 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 LY6G5BQ8NDX9 201 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 DNAAF1Q8NEP3 725 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 BPIFB6Q8NFQ5 453 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 OR13C9Q8NGT0 318 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 HAVCR2Q8TDQ0 301 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 H1FXQ92522 213 aaKnown RBP12.88□□□□□ -0.35
HMGA1-206ENST00000478214 TBX15Q96SF7 602 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 PCGF1Q9BSM1 259 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 COMMD4Q9H0A8 199 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 HES4Q9HCC6 221 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 MTCH1Q9NZJ7 389 aa12.88□□□□□ -0.35
HMGA1-206ENST00000478214 SLC25A10Q9UBX3 287 aaPredicted RBP12.88□□□□□ -0.35
HMGA1-206ENST00000478214 STAB1Q9NY15 2570 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 A0A0A6YYJ9 748 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 EFCAB10A6NFE3 127 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 F8VVB4 439 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 F8VWA3 439 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 GPR37O15354 613 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 LALBAP00709 142 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
HMGA1-206ENST00000478214 NDUFB7P17568 137 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 PRKACBP22694 351 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 PRDX2P32119 198 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 RBP2P50120 134 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 ATP1B3P54709 279 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 MTCP1P56278 107 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 RPL22L1Q6P5R6 122 aaKnown RBP12.87□□□□□ -0.35
HMGA1-206ENST00000478214 USP43Q70EL4 1123 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 TMEM185AQ8NFB2 350 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 GATAD2BQ8WXI9 593 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 RGP1Q92546 391 aaPredicted RBP12.87□□□□□ -0.35
HMGA1-206ENST00000478214 SLAMF9Q96A28 289 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 SDSLQ96GA7 329 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 WDFY2Q96P53 400 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 DCTN5Q9BTE1 182 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 SUCNR1Q9BXA5 334 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 CNTD2Q9H8S5 307 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 ELL3Q9HB65 397 aaPredicted RBP12.87□□□□□ -0.35
HMGA1-206ENST00000478214 PLCXD1Q9NUJ7 323 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 CHCHD3Q9NX63 227 aaKnown RBP12.87□□□□□ -0.35
HMGA1-206ENST00000478214 BABAM2Q9NXR7 383 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 PSORS1C1Q9UIG5 152 aa12.87□□□□□ -0.35
HMGA1-206ENST00000478214 SOX21Q9Y651 276 aaPredicted RBP12.87□□□□□ -0.35
HMGA1-206ENST00000478214 SIRT4Q9Y6E7 314 aaPredicted RBP12.87□□□□□ -0.35
HMGA1-206ENST00000478214 H0YJX3 145 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 TOX4O94842 621 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 OCM2P0CE71 109 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 OCMP0CE72 109 aaPredicted RBP12.86□□□□□ -0.35
HMGA1-206ENST00000478214 POU3F4P49335 361 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 CAV3P56539 151 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 HILS1P60008 231 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 CDK5R1Q15078 307 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 TUSC1Q2TAM9 212 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 CCDC58Q4VC31 144 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 METTL11BQ5VVY1 283 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 LHFPL2Q6ZUX7 228 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 AHSA2Q719I0 299 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 RNF144BQ7Z419 303 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 SIGLECL1Q8N7X8 197 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 RPS4Y2Q8TD47 263 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 TSEN15Q8WW01 171 aaKnown RBP12.86□□□□□ -0.35
HMGA1-206ENST00000478214 SPSB1Q96BD6 273 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 CEP19Q96LK0 163 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 OPALINQ96PE5 141 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 SPACA5Q96QH8 159 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 C19orf24Q9BVV8 132 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 MS4A7Q9GZW8 240 aaPredicted RBP12.86□□□□□ -0.35
HMGA1-206ENST00000478214 SIRPDQ9H106 197 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 CNOT2Q9NZN8 540 aaKnown RBP12.86□□□□□ -0.35
HMGA1-206ENST00000478214 ONECUT1Q9UBC0 465 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 OR14J1Q9UGF5 321 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 DHDHQ9UQ10 334 aa12.86□□□□□ -0.35
HMGA1-206ENST00000478214 H0YHG0 523 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 MT-ND2P03891 347 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 RPSAP08865 295 aaKnown RBP12.85□□□□□ -0.35
HMGA1-206ENST00000478214 C21orf33P30042 268 aaPredicted RBP12.85□□□□□ -0.35
HMGA1-206ENST00000478214 SOX2P48431 317 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 CAPZA1P52907 286 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 MED21Q13503 144 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 BRD3OSQ6XYD6 125 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 ZNF485Q8NCK3 441 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 OR52N1Q8NH53 320 aa12.85□□□□□ -0.35
HMGA1-206ENST00000478214 C8orf46Q8TAG6 207 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms