RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SF3A3Q12874 501 aaKnown RBP eCLIP16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 CGB2Q6NT52 195 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 C8orf86Q6ZUL3 223 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 ASCC1Q8N9N2 400 aaKnown RBP16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 OR4P4Q8NGL7 312 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 OTOSQ8NHW6 89 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 RBM14Q96PK6 669 aaKnown RBP16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 CLEC7AQ9BXN2 247 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 POLDIP2Q9Y2S7 368 aa16.07■□□□□ 0.16
PDLIM1-202ENST00000477757 A0A0U1RQV5 110 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 RIIAD1A6NNX1 92 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 ZNF737O75373 536 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 IFNGP01579 166 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 ZNF3P17036 446 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 HTR1DP28221 377 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 HAAOP46952 286 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 ZBTB49Q6ZSB9 765 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 MOB3CQ70IA8 216 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 TRPM8Q7Z2W7 1104 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 ZNF676Q8N7Q3 588 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 OR2T33Q8NG76 320 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 BCAS4Q8TDM0 211 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 PRR25Q96S07 402 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 TMEM133Q9H2Q1 129 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 NIPAL2Q9H841 368 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 GAR1Q9NY12 217 aaKnown RBP16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 SLC22A13Q9Y226 551 aa16.06■□□□□ 0.16
PDLIM1-202ENST00000477757 FABP3P05413 133 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 ATP6V1B1P15313 513 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 BRS3P32247 399 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 GP2P55259 537 aaKnown RBP16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 MEF2CQ06413 473 aaPredicted RBP16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 LCN1P1Q5VSP4 162 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 C18orf65Q6ZTR6 163 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 GDPD3Q7L5L3 318 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 ZNF573Q86YE8 665 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 ZNF454Q8N9F8 522 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 MCUR1Q96AQ8 359 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 GORASP2Q9H8Y8 452 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 MED20Q9H944 212 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 EFCAB1Q9HAE3 211 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 CMC2Q9NRP2 79 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 FGFR1OP2Q9NVK5 253 aa16.05■□□□□ 0.16
PDLIM1-202ENST00000477757 FAM183AA6NL82 134 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 NUDT19A8MXV4 375 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 M0QZK8 103 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 GMNNO75496 209 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 MPZP25189 248 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 CHATP28329 748 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 RIPPLY1Q0D2K3 151 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 SAMD4BQ5PRF9 694 aaKnown RBP16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 KCTD18Q6PI47 426 aaPredicted RBP16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 ZNF329Q86UD4 541 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 OR8H2Q8N162 312 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 BATF2Q8N1L9 274 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 ARMC1Q9NVT9 282 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 LYVE1Q9Y5Y7 322 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 LINC00312Q9Y6C7 94 aa16.04■□□□□ 0.16
PDLIM1-202ENST00000477757 SOX14O95416 240 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 LUMP51884 338 aaPredicted RBP16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 ARHGDIBP52566 201 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 HMGA2P52926 109 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 ERVK11-1P61568 191 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 C9orf152Q5JTZ5 239 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 ZNF684Q5T5D7 378 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 PLBD1Q6P4A8 553 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 KLHL30-AS1Q8NEE0 82 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 THEM6Q8WUY1 208 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 STMN2Q93045 179 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 SPAG4Q9NPE6 437 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 IL1RAPQ9NPH3 570 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 ZFP57Q9NU63 452 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 DPM3Q9P2X0 92 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 ENPP5Q9UJA9 477 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 KLHDC2Q9Y2U9 406 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 CSMD3Q7Z407 3707 aa16.03■□□□□ 0.16
PDLIM1-202ENST00000477757 hADV38S2A0JD32 116 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 KRT36O76013 467 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 NRASP01111 189 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 GASTP01350 101 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 IGLV3-1P01715 115 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 LYL1P12980 280 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 OR3A4PP47883 348 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 PSME3P61289 254 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 COMMD2Q86X83 199 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 FAM206AQ9NX38 181 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 PIGLQ9Y2B2 252 aa16.02■□□□□ 0.16
PDLIM1-202ENST00000477757 PQLC2LA1A4F0 135 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 ACOD1A6NK06 481 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 SELENOFO60613 162 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 BDH1Q02338 343 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 EDDM3AQ14507 147 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 SNAPC1Q16533 368 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 RCHY1Q96PM5 261 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 GPR84Q9NQS5 396 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 HHLA2Q9UM44 414 aa16.01■□□□□ 0.15
PDLIM1-202ENST00000477757 GSC2O15499 205 aa16■□□□□ 0.15
PDLIM1-202ENST00000477757 ZNF695Q8IW36 515 aa16■□□□□ 0.15
PDLIM1-202ENST00000477757 RNF148Q8N7C7 305 aa16■□□□□ 0.15
PDLIM1-202ENST00000477757 AQP11Q8NBQ7 271 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms