RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 AUP1Q9Y679 476 aa10.28□□□□□ -0.76
CLCNKA-205ENST00000477360 SVEP1Q4LDE5 3571 aa10.28□□□□□ -0.76
CLCNKA-205ENST00000477360 TRBV2A0A0J9YWF9 115 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 MAGEA13PA6NCF6 341 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 NKX6-3A6NJ46 265 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 OR2AT4A6NND4 320 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 SIGLEC5O15389 551 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 TMPRSS2O15393 492 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 PHF1O43189 567 aaPredicted RBP10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 ZFPL1O95159 310 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF20P17024 532 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 EGR1P18146 543 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 RBP2P50120 134 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 GTF2A1P52655 376 aaPredicted RBP10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 CAV3P56539 151 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 ERVK11-1P61568 191 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 IL13RA1P78552 427 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 MED22Q15528 200 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 UBE2V2Q15819 145 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 LRRC10Q5BKY1 277 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 LYPD2Q6UXB3 125 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 C1orf229Q6ZS94 237 aaPredicted RBP10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 C1orf122Q6ZSJ8 110 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 LHFPL2Q6ZUX7 228 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 SERPINA12Q8IW75 414 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 OR5D14Q8NGL3 314 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 OR5AK2Q8NH90 309 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 C8orf46Q8TAG6 207 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 THRSPQ92748 146 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 PGLYRP3Q96LB9 341 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 MGLLQ99685 303 aa10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 NUDT16L1Q9BRJ7 211 aaKnown RBP10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 METTL17Q9H7H0 456 aaPredicted RBP10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 SIRT4Q9Y6E7 314 aaPredicted RBP10.27□□□□□ -0.77
CLCNKA-205ENST00000477360 COL6A5A8TX70 2615 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 TRBV23-1A0A0A0MS06 115 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 DVL1O14640 695 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 AKR7A2O43488 359 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 NDUFB3O43676 98 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 AVPP01185 164 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 GYPAP02724 150 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 CD2P06729 351 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 CPEP16870 476 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 JUNBP17275 347 aaPredicted RBP10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 FPR2P25090 351 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 MAP2K4P45985 399 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 ATP1B3P54709 279 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 SYT6Q5T7P8 510 aaPredicted RBP10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 ACP7Q6ZNF0 438 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 SAXO1Q8IYX7 474 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 KIR3DL3Q8N743 410 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 BOLLQ8N9W6 283 aaKnown RBP10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 LY6G5BQ8NDX9 201 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 TBC1D15Q8TC07 691 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 GPR148Q8TDV2 347 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 BORCS8Q96FH0 119 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 OPALINQ96PE5 141 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 JMJD8Q96S16 334 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 FAM234AQ9H0X4 552 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 GPR173Q9NS66 373 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF222Q9UK12 451 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF281Q9Y2X9 895 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 KPTNQ9Y664 436 aa10.26□□□□□ -0.77
CLCNKA-205ENST00000477360 TRBV5-5A0A0J9YX44 114 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF879B4DU55 563 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 C22orf46C9J442 243 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 TCF21O43680 179 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 RHBDL1O75783 438 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 CYB5AP00167 134 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 KNG1P01042 644 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 SMIM18P0DKX4 95 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 PSG2P11465 335 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ATF1P18846 271 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 CELP19835 753 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 AMY2BP19961 511 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 EPHA1P21709 976 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 PSMA1P25786 263 aaKnown RBP10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 HNRNPA0Q13151 305 aaKnown RBP10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 TRAM1Q15629 374 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ODF4Q2M2E3 257 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 YIF1BQ5BJH7 314 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF529Q6P280 563 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 MKXQ8IYA7 352 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 RDH10Q8IZV5 341 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF561Q8N587 486 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 MS4A15Q8N5U1 240 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ZSCAN4Q8NAM6 433 aaPredicted RBP10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 OR13C3Q8NGS6 347 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ZNF418Q8TF45 676 aaPredicted RBP10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 TMEM158Q8WZ71 300 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 RGP1Q92546 391 aaPredicted RBP10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 GHSRQ92847 366 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 UFD1Q92890 307 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 MUL1Q969V5 352 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 FGGYQ96C11 551 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 ADAT3Q96EY9 351 aaPredicted RBP10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 CCL13Q99616 98 aa10.25□□□□□ -0.77
CLCNKA-205ENST00000477360 PDCD1LG2Q9BQ51 273 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms