RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 CTDSP1Q9GZU7 261 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 CDT1Q9H211 546 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 A4GALTQ9NPC4 353 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 INPP5EQ9NRR6 644 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 SLC7A10Q9NS82 523 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 OSER1Q9NX31 292 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 WSB2Q9NYS7 404 aaPredicted RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 MARCH4Q9P2E8 410 aaPredicted RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 LRIT1Q9P2V4 623 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 SLC25A10Q9UBX3 287 aaPredicted RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 MRM2Q9UI43 246 aaKnown RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 ZNF391Q9UJN7 358 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 SLC17A4Q9Y2C5 497 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 NOP16Q9Y3C1 178 aaKnown RBP3.66□□□□□ -1.82
CD55-208ENST00000476590 LIPGQ9Y5X9 500 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 LY75O60449 1722 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 MEGF6O75095 1541 aa3.66□□□□□ -1.82
CD55-208ENST00000476590 TRAV1-2A0A0B4J238 106 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 IGLC7A0M8Q6 106 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 SLC17A3O00476 420 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 TRAF3IP2O43734 574 aaPredicted RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 PRICKLE3O43900 615 aaPredicted RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 SCGB2A1O75556 95 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 OPN1SWP03999 348 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 C4BPAP04003 597 aaKnown RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 HLA-DQB2P05538 268 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 AKAIN1P0CW23 69 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 IGLC2P0DOY2 106 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 IGLC3P0DOY3 106 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 RPS4Y1P22090 263 aaKnown RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 S100A3P33764 101 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 BSGP35613 385 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 CTRLP40313 264 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 SLC25A1P53007 311 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 MFAP4P55083 255 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 TAS2R43P59537 309 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 SELENOWP63302 87 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 CYCSP99999 105 aaKnown RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 TMEM267Q0VDI3 215 aaPredicted RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 GAGE5Q13069 117 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 GAGE6Q13070 117 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 FZD2Q14332 565 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 TMEM69Q5SWH9 247 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 ABHD17BQ5VST6 288 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 NCBP2-AS2Q69YL0 99 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 AMMECR1LQ6DCA0 310 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 RSPO2Q6UXX9 243 aaPredicted RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 DNM1P46Q6ZS02 220 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 NEGR1Q7Z3B1 354 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 BCDIN3DQ7Z5W3 292 aaKnown RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 ZNF429Q86V71 674 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 AMIGO3Q86WK7 504 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 GPSM1Q86YR5 675 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 SAXO1Q8IYX7 474 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 SMIM20Q8N5G0 67 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 ZNF709Q8N972 641 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 TMEM116Q8NCL8 245 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 OR2T33Q8NG76 320 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 LGALS14Q8TCE9 139 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 NUDT8Q8WV74 236 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 SEH1LQ96EE3 360 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 AQP10Q96PS8 301 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 ATOH8Q96SQ7 321 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 NIPSNAP3BQ9BS92 247 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 SGK2Q9HBY8 427 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 ACER3Q9NUN7 267 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 TVP23BQ9NYZ1 205 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 UFC1Q9Y3C8 167 aa3.65□□□□□ -1.82
CD55-208ENST00000476590 AK6Q9Y3D8 172 aaKnown RBP3.65□□□□□ -1.82
CD55-208ENST00000476590 IGHV2-26A0A0B4J1V2 119 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 A0A1B0GTL3 188 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 FAM230AA0A1W2PPH8 454 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 A0A1W2PQF6 199 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 ODAMA1E959 279 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 C2CD4BA6NLJ0 364 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 HIDE1A8MVS5 230 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 HHLA1C9JL84 531 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 FAM229AH3BQW9 127 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 M0QXV9 152 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 LEFTY2O00292 366 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 HCRTO43612 131 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 DUSP11O75319 330 aaKnown RBP3.65□□□□□ -1.83
CD55-208ENST00000476590 HYPMO75409 117 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 MAS1P04201 325 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 GAPDHP04406 335 aaKnown RBP3.65□□□□□ -1.83
CD55-208ENST00000476590 CEACAM5P06731 702 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 RAB40ALP0C0E4 278 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 IGLC1P0CG04 106 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 LYL1P12980 280 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 SERPINA4P29622 427 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 CMPK1P30085 196 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 LTBRP36941 435 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 TSFMP43897 325 aaKnown RBP3.65□□□□□ -1.83
CD55-208ENST00000476590 PPICP45877 212 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 GYG1P46976 350 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 ASCL1P50553 236 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 HMGCS2P54868 508 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 CLDN15P56746 228 aa3.65□□□□□ -1.83
CD55-208ENST00000476590 FAM3BP58499 235 aaPredicted RBP3.65□□□□□ -1.83
CD55-208ENST00000476590 HSD52Q0P140 79 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms