RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MED27Q6P2C8 311 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 CLEC19AQ6UXS0 136 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 ATPAF2Q8N5M1 289 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 OR8K3Q8NH51 312 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 BEX2Q9BXY8 128 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 FRMD8P1Q9BZ68 369 aaPredicted RBP3.22□□□□□ -1.89
VPS50-212ENST00000476413 SLC38A1Q9H2H9 487 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 DHX35Q9H5Z1 703 aaKnown RBP3.22□□□□□ -1.89
VPS50-212ENST00000476413 C12orf4Q9NQ89 552 aa3.22□□□□□ -1.89
VPS50-212ENST00000476413 ELP1O95163 1332 aa3.21□□□□□ -1.89
VPS50-212ENST00000476413 A0A0G2JMP0 313 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 A0A0X1KG70 313 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.21□□□□□ -1.9
VPS50-212ENST00000476413 RNF113AO15541 343 aaKnown RBP3.21□□□□□ -1.9
VPS50-212ENST00000476413 PSMB2P49721 201 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 TNNC1P63316 161 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 C16orf47Q6ZP98 133 aaPredicted RBP3.21□□□□□ -1.9
VPS50-212ENST00000476413 APCDD1LQ8NCL9 501 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 OR4D6Q8NGJ1 314 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 FAM57AQ8TBR7 257 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 METTL26Q96S19 204 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 CTRCQ99895 268 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 RHOXF2Q9BQY4 288 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 TBL1XR1Q9BZK7 514 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 ANXA10Q9UJ72 324 aa3.21□□□□□ -1.9
VPS50-212ENST00000476413 KLF13Q9Y2Y9 288 aaPredicted RBP3.21□□□□□ -1.9
VPS50-212ENST00000476413 RAB19A4D1S5 217 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 ZNF879B4DU55 563 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 DHRS3O75911 302 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 OR4Q2P0C623 313 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 HLA-GP17693 338 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 BTN1A1Q13410 526 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 FAM53BQ14153 422 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 PDPNQ86YL7 162 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 TRIML2Q8N7C3 387 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 ORAOV1Q8WV07 137 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 RILPQ96NA2 401 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 PLEKHA1Q9HB21 404 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 CYB5R1Q9UHQ9 305 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 RWDD2AQ9UIY3 292 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 NXT1Q9UKK6 140 aaKnown RBP3.2□□□□□ -1.9
VPS50-212ENST00000476413 RAB22AQ9UL26 194 aa3.2□□□□□ -1.9
VPS50-212ENST00000476413 RPRD2Q5VT52 1461 aaKnown RBP3.2□□□□□ -1.9
VPS50-212ENST00000476413 A0A1B0GW15 77 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 ZNF98A6NK75 572 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 DNASE1L1P49184 302 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 RPL10AP62906 217 aaKnown RBP3.19□□□□□ -1.9
VPS50-212ENST00000476413 MAPRE2Q15555 327 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 PSG3Q16557 428 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 FAM104BQ5XKR9 115 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 KCTD16Q68DU8 428 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 TBPL2Q6SJ96 375 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 CCNYL1Q8N7R7 359 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 SPERTQ8NA61 448 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 SMIM8Q96KF7 97 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 DERL3Q96Q80 235 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 ASB7Q9H672 318 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 POFUT2Q9Y2G5 429 aa3.19□□□□□ -1.9
VPS50-212ENST00000476413 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.19□□□□□ -1.9
VPS50-212ENST00000476413 COL1A2P08123 1366 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 PRAMEF26H0Y7S4 382 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 CLDN34H7C241 214 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 hCG_2039718K7EN88 272 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 APOA1P02647 267 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 MPV17P39210 176 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 IDH2P48735 452 aaKnown RBP3.18□□□□□ -1.9
VPS50-212ENST00000476413 MEF2CQ06413 473 aaPredicted RBP3.18□□□□□ -1.9
VPS50-212ENST00000476413 CLLU1OSQ5K130 101 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 RESP18Q5W5W9 173 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 CYP4Z2PQ8N1L4 340 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 CDRT4Q8N9R6 151 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 DOK4Q8TEW6 326 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 ZNF75AQ96N20 296 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 CIB1Q99828 191 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
VPS50-212ENST00000476413 MIA3Q5JRA6 1907 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 DYSFO75923 2080 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 ENSAO43768 121 aaKnown RBP3.17□□□□□ -1.9
VPS50-212ENST00000476413 CST4P01036 141 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 CD5P06127 495 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 SEC11BP0C7V7 166 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 TEAD1P28347 426 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 TGM4P49221 684 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 GDI2P50395 445 aaKnown RBP3.17□□□□□ -1.9
VPS50-212ENST00000476413 GPR176Q14439 515 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 IDNKQ5T6J7 187 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 ITPRIPQ8IWB1 547 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 ZNF555Q8NEP9 628 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 SLC26A10Q8NG04 563 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 QKIQ96PU8 341 aaKnown RBP eCLIP3.17□□□□□ -1.9
VPS50-212ENST00000476413 VAT1Q99536 393 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 COPS4Q9BT78 406 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 MRPL20Q9BYC9 149 aaKnown RBP3.17□□□□□ -1.9
VPS50-212ENST00000476413 WDR55Q9H6Y2 383 aaPredicted RBP3.17□□□□□ -1.9
VPS50-212ENST00000476413 IL37Q9NZH6 218 aa3.17□□□□□ -1.9
VPS50-212ENST00000476413 DHCR7Q9UBM7 475 aaKnown RBP3.17□□□□□ -1.9
VPS50-212ENST00000476413 MRM2Q9UI43 246 aaKnown RBP3.17□□□□□ -1.9
VPS50-212ENST00000476413 PLXNB3Q9ULL4 1909 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms