RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 SIRPDQ9H106 197 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 SLITRK2Q9H156 845 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 CNTD2Q9H8S5 307 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 FRRS1LQ9P0K9 344 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 MYRFQ9Y2G1 1151 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 MMP24Q9Y5R2 645 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 KPTNQ9Y664 436 aa13.35□□□□□ -0.27
COL1A1-205ENST00000476387 IGKV1D-17A0A075B6S4 117 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 A0A1W2PQ09 198 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 ISG15P05161 165 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 OCM2P0CE71 109 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 OCMP0CE72 109 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-205ENST00000476387 MPZP25189 248 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 FUT6P51993 359 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 CAPZA1P52907 286 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 CAV3P56539 151 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 NANOS3P60323 173 aaKnown RBP13.34□□□□□ -0.27
COL1A1-205ENST00000476387 IL24Q13007 206 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 MRPL28Q13084 256 aaKnown RBP13.34□□□□□ -0.27
COL1A1-205ENST00000476387 ALKBH1Q13686 389 aaKnown RBP13.34□□□□□ -0.27
COL1A1-205ENST00000476387 UBE2V2Q15819 145 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 DGUOKQ16854 277 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF691Q5VV52 312 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 EGFL6Q8IUX8 553 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 SETD9Q8NE22 299 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 OR52I1Q8NGK6 324 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 RNF166Q96A37 237 aaPredicted RBP13.34□□□□□ -0.27
COL1A1-205ENST00000476387 DMRTB1Q96MA1 342 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 NRIP2Q9BQI9 281 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 ERVK13-1Q9NX77 482 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 ZNF222Q9UK12 451 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 HHLA2Q9UM44 414 aa13.34□□□□□ -0.27
COL1A1-205ENST00000476387 CENPVL3A0A0U1RRI6 287 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 A0A1B0GUS0 222 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 IRGMA1A4Y4 181 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 RFPL4AA6NLU0 287 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 RFPL4AL1F8VTS6 287 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 SLC1A7O00341 560 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 NOS1APO75052 506 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-205ENST00000476387 RUSC1-AS1Q66K80 236 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 ANGPTL5Q86XS5 388 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 CALHM1Q8IU99 346 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 BATF2Q8N1L9 274 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 DHRSXQ8N5I4 330 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 KIR3DL3Q8N743 410 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 ZNRF1Q8ND25 227 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 LY6G5BQ8NDX9 201 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 OR13C3Q8NGS6 347 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 C8orf46Q8TAG6 207 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 HAVCR2Q8TDQ0 301 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 LHX4Q969G2 390 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 SDSLQ96GA7 329 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 COMMD4Q9H0A8 199 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 VCXQ9H320 206 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 MRPS18AQ9NVS2 196 aaKnown RBP13.33□□□□□ -0.28
COL1A1-205ENST00000476387 POMT1Q9Y6A1 747 aa13.33□□□□□ -0.28
COL1A1-205ENST00000476387 IGHV1-69DA0A0B4J2H0 117 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 TMEM212A6NML5 194 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 OR4C45A6NMZ5 311 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 ANKRD65E5RJM6 399 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 WBP4O75554 376 aaKnown RBP13.32□□□□□ -0.28
COL1A1-205ENST00000476387 CLIC3O95833 236 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 IGHV1-69P01742 117 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 RPSAP08865 295 aaKnown RBP13.32□□□□□ -0.28
COL1A1-205ENST00000476387 CCDC159P0C7I6 412 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 RBP2P50120 134 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 GBX2P52951 348 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-205ENST00000476387 ATP1B3P54709 279 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 RPL15P61313 204 aaKnown RBP13.32□□□□□ -0.28
COL1A1-205ENST00000476387 SMN1Q16637 294 aaKnown RBP13.32□□□□□ -0.28
COL1A1-205ENST00000476387 UTS2BQ765I0 119 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 VMO1Q7Z5L0 202 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 ZNF561Q8N587 486 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 CNIH3Q8TBE1 160 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 SSMEM1Q8WWF3 244 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 FGGYQ96C11 551 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 ADAT3Q96EY9 351 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-205ENST00000476387 CEP19Q96LK0 163 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 ISG20L2Q9H9L3 353 aaKnown RBP13.32□□□□□ -0.28
COL1A1-205ENST00000476387 OR14J1Q9UGF5 321 aa13.32□□□□□ -0.28
COL1A1-205ENST00000476387 TRBV23-1A0A0A0MS06 115 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 FAM181BA6NEQ2 426 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 NDUFA7O95182 113 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 CYB5AP00167 134 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 CRYBA1P05813 215 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 MELTFP08582 738 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 MDKP21741 143 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-205ENST00000476387 PRKACBP22694 351 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 DCKP27707 260 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 PRDX2P32119 198 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 POU3F4P49335 361 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 BLMHQ13867 455 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 LHFPL2Q6ZUX7 228 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 SLC25A26Q70HW3 274 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 DNAAF1Q8NEP3 725 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 OR10AC1Q8NH08 325 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 OR4F5Q8NH21 305 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 SLAMF9Q96A28 289 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 SPSB1Q96BD6 273 aa13.31□□□□□ -0.28
COL1A1-205ENST00000476387 ELL3Q9HB65 397 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms