RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 Q8IYB0 196 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 TMEM203Q969S6 136 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 SLAMF9Q96A28 289 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 GPER1Q99527 375 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 LPAR2Q9HBW0 351 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 NOX4Q9NPH5 578 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 SNTG1Q9NSN8 517 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 MTCH1Q9NZJ7 389 aa24.68■■□□□ 1.54
HOXB3-208ENST00000476342 DOCK11Q5JSL3 2073 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 GABRA5P31644 462 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 STUMQ69YW2 141 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 UNQ9370/PRO34162Q6UXP9 181 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 SLC36A1Q7Z2H8 476 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 LURAP1LQ8IV03 231 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 SSBP3Q9BWW4 388 aaPredicted RBP24.67■■□□□ 1.54
HOXB3-208ENST00000476342 DNTTIP1Q9H147 329 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 KAAG1Q9UBP8 84 aa24.67■■□□□ 1.54
HOXB3-208ENST00000476342 OR2AT4A6NND4 320 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 TRAPPC2LH3BP13 241 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 TNFRSF13BO14836 293 aaPredicted RBP24.66■■□□□ 1.54
HOXB3-208ENST00000476342 TMPRSS2O15393 492 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 SPRY1O43609 319 aaPredicted RBP24.66■■□□□ 1.54
HOXB3-208ENST00000476342 SC5DO75845 299 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 PSMB9P28065 219 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 PITPNBP48739 271 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 ERVK11-1P61568 191 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 SEC61A1P61619 476 aaKnown RBP24.66■■□□□ 1.54
HOXB3-208ENST00000476342 RPS25P62851 125 aaKnown RBP24.66■■□□□ 1.54
HOXB3-208ENST00000476342 GNB2P62879 340 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 DDI2Q5TDH0 399 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 SATL1Q86VE3 508 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 GLCCI1Q86VQ1 547 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 OR52N4Q8NGI2 321 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 OR5D18Q8NGL1 313 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 HES4Q9HCC6 221 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 CLN8Q9UBY8 286 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 KCNS2Q9ULS6 477 aa24.66■■□□□ 1.54
HOXB3-208ENST00000476342 TRAV8-7A0A075B6U6 113 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 NKX6-3A6NJ46 265 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 A8MXK9 166 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 PIN1P1O15428 100 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 NPY4RP50391 375 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 INSL4Q14641 139 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 ATPAF1Q5TC12 328 aaPredicted RBP24.65■■□□□ 1.54
HOXB3-208ENST00000476342 CEACAM19Q7Z692 300 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 OR5T2Q8NGG2 359 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 YAE1D1Q9NRH1 226 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 SF3B6Q9Y3B4 125 aaKnown RBP24.65■■□□□ 1.54
HOXB3-208ENST00000476342 HIVEP2P31629 2446 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 MTORP42345 2549 aa24.65■■□□□ 1.54
HOXB3-208ENST00000476342 INMTO95050 263 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 DVL1P1P54792 670 aaPredicted RBP24.64■■□□□ 1.54
HOXB3-208ENST00000476342 Q71RC1 249 aaPredicted RBP24.64■■□□□ 1.54
HOXB3-208ENST00000476342 SAXO1Q8IYX7 474 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 BATF2Q8N1L9 274 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 PNLDC1Q8NA58 520 aaKnown RBP24.64■■□□□ 1.54
HOXB3-208ENST00000476342 ZSCAN4Q8NAM6 433 aaPredicted RBP24.64■■□□□ 1.54
HOXB3-208ENST00000476342 ANGPTL6Q8NI99 470 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 TMEM186Q96B77 213 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 SMURF1Q9HCE7 757 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 NDUFB11Q9NX14 153 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 CTSZQ9UBR2 303 aa24.64■■□□□ 1.54
HOXB3-208ENST00000476342 TRAV20A0A0B4J274 112 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 A8MV72 311 aaPredicted RBP24.63■■□□□ 1.53
HOXB3-208ENST00000476342 CCRL2O00421 344 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 RGS9O75916 674 aaPredicted RBP24.63■■□□□ 1.53
HOXB3-208ENST00000476342 TMEM225BP0DP42 221 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 ZNF93P35789 620 aaPredicted RBP24.63■■□□□ 1.53
HOXB3-208ENST00000476342 ZP1P60852 638 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 LCN2P80188 198 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 SSX1Q16384 188 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 CRIP3Q6Q6R5 217 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 RNF144BQ7Z419 303 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 TSPAN14Q8NG11 270 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 PHYHIPQ92561 330 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 CCL13Q99616 98 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 ZNF696Q9H7X3 374 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 TCF7L1Q9HCS4 588 aa24.63■■□□□ 1.53
HOXB3-208ENST00000476342 A0A087WXM4 84 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 ANGPTL7O43827 346 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 PSG2P11465 335 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 GABRA2P47869 451 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 HSD17B12Q53GQ0 312 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 FIP1L1Q6UN15 594 aaKnown RBP24.62■■□□□ 1.53
HOXB3-208ENST00000476342 EMG1Q92979 244 aaKnown RBP24.62■■□□□ 1.53
HOXB3-208ENST00000476342 RHOFQ9HBH0 211 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 VCX3AQ9NNX9 186 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 HIF1ANQ9NWT6 349 aa24.62■■□□□ 1.53
HOXB3-208ENST00000476342 GABRPO00591 440 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 PHF1O43189 567 aaPredicted RBP24.61■■□□□ 1.53
HOXB3-208ENST00000476342 MAS1P04201 325 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 UCHL1P09936 223 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 WDR25Q64LD2 544 aaPredicted RBP24.61■■□□□ 1.53
HOXB3-208ENST00000476342 ZNF841Q6ZN19 808 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 ZNF788Q6ZQV5 615 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 NKAIN3Q8N8D7 197 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 TNFAIP8L1Q8WVP5 186 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 MED30Q96HR3 178 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 FAM192AQ9GZU8 254 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 OR5V1Q9UGF6 321 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms