RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 CXCR4P61073 352 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF273Q14593 569 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 KPRPQ5T749 579 aaPredicted RBP9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SLX4IPQ5VYV7 408 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 NXNL2Q5VZ03 156 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C12orf73Q69YU5 71 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 KDM4DQ6B0I6 523 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 LIAT1Q6ZQX7 453 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C10orf67Q8IYJ2 551 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DYNAPQ8N1N2 210 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 Q8N2B8 174 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OR51G2Q8NGK0 314 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OR2T27Q8NH04 317 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FAM110DQ8TAY7 271 aaPredicted RBP9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CNN2Q99439 309 aaKnown RBP9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CDCA4Q9BXL8 241 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MOB1AQ9H8S9 216 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SEBOXQ9HB31 216 aaPredicted RBP9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CLN6Q9NWW5 311 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OR52A1Q9UKL2 312 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FOXJ3Q9UPW0 622 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 DNAH3Q8TD57 4116 aa9.92□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 IGKV1-27A0A075B6S5 117 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ODF3BA8MYP8 253 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 LOC110117498-PIK3R3F6TDL0 507 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 F8VVB4 439 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 F8VWA3 439 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SLC1A7O00341 560 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MITFO75030 526 aaPredicted RBP9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OPN1MWP04001 364 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CSF1P09603 554 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OPN1MW2P0DN77 364 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OPN1MW3P0DN78 364 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 FCGR1AP12314 374 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CCL3L1P16619 93 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 BMXP51813 675 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 IL24Q13007 206 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 LY6EQ16553 131 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 BEAN1Q3B7T3 259 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CCBE1Q6UXH8 406 aaPredicted RBP9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ASRGL1Q7L266 308 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SSX6Q7RTT6 188 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SLC35F2Q8IXU6 374 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TCEANCQ8N8B7 351 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OR4M1Q8NGD0 313 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TMEM163Q8TC26 289 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RNF166Q96A37 237 aaPredicted RBP9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TTTY10Q9BZA0 68 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PKIBQ9C010 78 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RAB18Q9NP72 206 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 GPR173Q9NS66 373 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 USE1Q9NZ43 259 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 IKZF2Q9UKS7 526 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 POLDIP2Q9Y2S7 368 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SNX5Q9Y5X3 404 aa9.91□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 A0A1W2PPH5 198 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 A6NIN4 97 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 M0R129 80 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 NXPH2O95156 264 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 RBP4P02753 201 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CAPZA1P52907 286 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ACTR3P61158 418 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 UBE2V2Q15819 145 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 PLEKHG7Q6ZR37 379 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 Q6ZTK2 550 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 LHFPL4Q7Z7J7 247 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 COMMD2Q86X83 199 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 CATSPERDQ86XM0 798 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ANGPTL5Q86XS5 388 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 C1QL4Q86Z23 238 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 OR11H6Q8NGC7 330 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF702PQ9H963 129 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SERTAD4Q9NUC0 356 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 MTCH1Q9NZJ7 389 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 SLC22A13Q9Y226 551 aa9.9□□□□□ -0.82
MSH5-SAPCD1-205ENST00000476085 ZNF728P0DKX0 622 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 FASP25445 335 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 DYNLT3P51808 116 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ISL1P61371 349 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ATP6AP1Q15904 470 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 BCL2L15Q5TBC7 163 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZNF626Q68DY1 528 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 HIST2H2BDQ6DRA6 164 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 KLHDC1Q8N7A1 406 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OR4C13Q8NGP0 309 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 OR2T6Q8NHC8 308 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 MALSU1Q96EH3 234 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 GABARAPL1Q9H0R8 117 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 TBL2Q9Y4P3 447 aaKnown RBP9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 AP4S1Q9Y587 144 aa9.89□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 hCG_1809904A0A1W2PP81 198 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 A0A1W2PPE2 198 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 A0A1W2PR64 198 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 A0A1W2PRV1 198 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 A6NDX4 124 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ADARB2-AS1A8MUL3 147 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 ZNF670-ZNF695F2Z2N8 137 aa9.88□□□□□ -0.83
MSH5-SAPCD1-205ENST00000476085 G3V4G9 280 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms