RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 SULT1A3P0DMM9 295 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 SULT1A4P0DMN0 295 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 RAC2P15153 192 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 PTAFRP25105 342 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 TOR2AQ5JU69 321 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 BTN2A1Q7KYR7 527 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 KRT74Q7RTS7 529 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 DMRTC2Q8IXT2 367 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-217ENST00000475693 SLC25A38Q96DW6 304 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 METTL17Q9H7H0 456 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-217ENST00000475693 ATP23Q9Y6H3 246 aa15.44■□□□□ 0.06
ATG4B-217ENST00000475693 MEGF11A6BM72 1044 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 TIMM8AO60220 97 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-217ENST00000475693 IFNA7P01567 189 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 PRF1P14222 555 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 SRSF1Q07955 248 aaKnown RBP eCLIP15.43■□□□□ 0.067e-6■□□□□ 10.2
ATG4B-217ENST00000475693 ZNF718Q3SXZ3 478 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 CLLU1Q5K131 121 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 MTFR2Q6P444 385 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 OR56B4Q8NH76 319 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 C10orf35Q96D05 121 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 CACNG6Q9BXT2 260 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 MRPL37Q9BZE1 423 aaKnown RBP15.43■□□□□ 0.06
ATG4B-217ENST00000475693 ZNF222Q9UK12 451 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 LRRK2Q5S007 2527 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 DOPEY1Q5JWR5 2465 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 TMEM272A0A1B0GTI8 110 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 LOC105371267A0A1B0GV96 52 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 ANKRD30BLA7E2S9 258 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 CD37P11049 281 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 GCH1P30793 250 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 C3orf36Q3SXR2 165 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 SMUG1Q53HV7 270 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 C1orf100Q5SVJ3 147 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 AWAT2Q6E213 333 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 GLIPR1L1Q6UWM5 242 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 RTN4RL2Q86UN3 420 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 ZDHHC23Q8IYP9 409 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 CMTM4Q8IZR5 234 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 OR10A4Q9H209 315 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 CA10Q9NS85 328 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 SCP2D1Q9UJQ7 156 aa15.43■□□□□ 0.06
ATG4B-217ENST00000475693 TRAV6A0A075B6T7 132 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 SHISA9B4DS77 424 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 ZNF732B4DXR9 585 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 MLNRO43193 412 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 CST4P01036 141 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 PTHLHP12272 177 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 PPP3CBP16298 524 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 GLRXP35754 106 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 SPRNQ5BIV9 151 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 NCMAPQ5T1S8 102 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 ZNF808Q8N4W9 903 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-217ENST00000475693 NKAIN3Q8N8D7 197 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 TMEM104Q8NE00 496 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 CSNK2A3Q8NEV1 391 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 BORCS8Q96FH0 119 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 USB1Q9BQ65 265 aaKnown RBP15.42■□□□□ 0.06
ATG4B-217ENST00000475693 BANF2Q9H503 90 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 SPATA2Q9UM82 520 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 MRPS28Q9Y2Q9 187 aaKnown RBP15.42■□□□□ 0.06
ATG4B-217ENST00000475693 TENM4Q6N022 2769 aa15.42■□□□□ 0.06
ATG4B-217ENST00000475693 J3QW42 95 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 H2AFB2P0C5Z0 115 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 WDR86Q86TI4 376 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 ZCCHC24Q8N2G6 241 aaKnown RBP15.41■□□□□ 0.06
ATG4B-217ENST00000475693 SPERTQ8NA61 448 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 CCDC54Q8NEL0 328 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 OR11H4Q8NGC9 324 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 OR6M1Q8NGM8 313 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 SYNPRQ8TBG9 265 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 TNFAIP8L1Q8WVP5 186 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 C1orf147Q96MC9 270 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-217ENST00000475693 ELL3Q9HB65 397 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-217ENST00000475693 TACC2O95359 2948 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 IQCF6A8MYZ5 107 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 PRAF2O60831 178 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 PTGFRP43088 359 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 RBP2P50120 134 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 UNC119Q13432 240 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 SLC22A6Q4U2R8 563 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 OR5P3Q8WZ94 311 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 PIK3IP1Q96FE7 263 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 CLEC4MQ9H2X3 399 aaPredicted RBP15.41■□□□□ 0.06
ATG4B-217ENST00000475693 SPEF1Q9Y4P9 236 aa15.41■□□□□ 0.06
ATG4B-217ENST00000475693 IGKV1-12A0A0C4DH73 117 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 F5H5P2 479 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 KDM4BO94953 1096 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 IGKV1D-12P01611 117 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 ERCC1P07992 297 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-217ENST00000475693 TMEM225BP0DP42 221 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 VSIG8P0DPA2 414 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 GIFP27352 417 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 HAAOP46952 286 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 ZP1P60852 638 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 KLF9Q13886 244 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-217ENST00000475693 GRK1Q15835 563 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 CEACAM21Q3KPI0 293 aa15.4■□□□□ 0.06
ATG4B-217ENST00000475693 MBNL2Q5VZF2 373 aaKnown RBP15.4■□□□□ 0.06
ATG4B-217ENST00000475693 SMIM4Q8WVI0 70 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms