RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 TAAR2Q9P1P5 351 aa10.34□□□□□ -0.75
U2AF1-209ENST00000475639 COA3Q9Y2R0 106 aaPredicted RBP10.34□□□□□ -0.75
U2AF1-209ENST00000475639 PLXNB3Q9ULL4 1909 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 LOC107986453A0A1B0GWG9 222 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 SDCBPO00560 298 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-209ENST00000475639 PRSS1P07477 247 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 CST2P09228 141 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 SULT1A1P50225 295 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 B4GALNT1Q00973 533 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 PRDX4Q13162 271 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TMEM64Q6YI46 380 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 ZDHHC16Q969W1 377 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 ANKRD10Q9NXR5 420 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TRAPPC1Q9Y5R8 145 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 RCC1P18754 421 aaPredicted RBP10.33□□□□□ -0.76
U2AF1-209ENST00000475639 GLRA1P23415 457 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 PSMB5P28074 263 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 HTR1DP28221 377 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 SDHAP31040 664 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 RPL27P61353 136 aaKnown RBP10.33□□□□□ -0.76
U2AF1-209ENST00000475639 SKP2Q13309 424 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 MOGAT2Q3SYC2 334 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 FAM71E1Q6IPT2 247 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 RLN3Q8WXF3 142 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 NEURL3Q96EH8 262 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TEAD3Q99594 435 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 ADGRL4Q9HBW9 690 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 PLXND1Q9Y4D7 1925 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 RNF222A6NCQ9 220 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 K7ERU9 68 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 NEURL1O76050 574 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 CD160O95971 181 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 IL2RAP01589 272 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 IAPPP10997 89 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 CYBAP13498 195 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 PPOXP50336 477 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 NOVA1P51513 510 aaKnown RBP10.33□□□□□ -0.76
U2AF1-209ENST00000475639 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TMEM191AQ9H0A3 160 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 MRPS2Q9Y399 296 aaKnown RBP10.33□□□□□ -0.76
U2AF1-209ENST00000475639 A0A1W2PNV4 684 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 FGF16O43320 207 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 GYPAP02724 150 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 DLX1P56177 255 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TAS2R60P59551 318 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TGIF1Q15583 401 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 FCRL6Q6DN72 434 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 WDR73Q6P4I2 378 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 C19orf47Q8N9M1 422 aaKnown RBP10.33□□□□□ -0.76
U2AF1-209ENST00000475639 MEGF10Q96KG7 1140 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 POM121L2Q96KW2 1035 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TNFSF18Q9UNG2 199 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 TIMM10BQ9Y5J6 103 aa10.33□□□□□ -0.76
U2AF1-209ENST00000475639 H3BNC9 293 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 IGLV3-27P01718 113 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 HERVK_113P61574 105 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 ZNF345Q14585 488 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 C21orf62-AS1Q17RA5 79 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 OR5AS1Q8N127 324 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 MARS2Q96GW9 593 aaKnown RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 CHST6Q9GZX3 395 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 UBE2ZQ9H832 354 aaPredicted RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 ANKRD61A6NGH8 418 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 BCAT2O15382 392 aaPredicted RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 PYY3Q5JQD4 70 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 DMKNQ6E0U4 476 aaPredicted RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 GDF7Q7Z4P5 450 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 TMEM116Q8NCL8 245 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 ASB13Q8WXK3 278 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 ACY3Q96HD9 319 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 FAM166BA8MTA8 275 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 M0R135 149 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 SNRNP200O75643 2136 aaKnown RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 OR5K2Q8NHB8 316 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 ZNF799Q96GE5 643 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 MS4A4AQ96JQ5 239 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 INSM2Q96T92 566 aaPredicted RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 LAT2Q9GZY6 243 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 MAGT1Q9H0U3 335 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 C12orf49Q9H741 205 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 SIRT3Q9NTG7 399 aaPredicted RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 RCC2Q9P258 522 aaKnown RBP10.32□□□□□ -0.76
U2AF1-209ENST00000475639 SEC16AO15027 2179 aa10.32□□□□□ -0.76
U2AF1-209ENST00000475639 OR2L13Q8N349 312 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 KCNK15Q9H427 330 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 CD207Q9UJ71 328 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 SLC17A4Q9Y2C5 497 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 WSB1Q9Y6I7 421 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 TRIP12Q14669 1992 aaPredicted RBP10.31□□□□□ -0.76
U2AF1-209ENST00000475639 AVPR2P30518 371 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 SNRPNP63162 240 aaKnown RBP10.31□□□□□ -0.76
U2AF1-209ENST00000475639 HGFACQ04756 655 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 SLC39A11Q8N1S5 342 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 C17orf78Q8N4C9 275 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 EDAQ92838 391 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 KISS1RQ969F8 398 aaPredicted RBP10.31□□□□□ -0.76
U2AF1-209ENST00000475639 ERGIC1Q969X5 290 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 TAAR6Q96RI8 345 aa10.31□□□□□ -0.76
U2AF1-209ENST00000475639 GFI1Q99684 422 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms