RNA–Protein interactions for RNA: ENST00000475335.5

SIKE1-208, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-208ENST00000475335 ARF6P62330 175 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 UBA52P62987 128 aaKnown RBP17.31■□□□□ 0.36
SIKE1-208ENST00000475335 BATF2Q8N1L9 274 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 Q8N7P7 452 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 ZNRF1Q8ND25 227 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 DNAAF1Q8NEP3 725 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 RPS4Y2Q8TD47 263 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 FAM216AQ8WUB2 273 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 FGGYQ96C11 551 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 MS4A7Q9GZW8 240 aaPredicted RBP17.31■□□□□ 0.36
SIKE1-208ENST00000475335 ELL3Q9HB65 397 aaPredicted RBP17.31■□□□□ 0.36
SIKE1-208ENST00000475335 MTCH1Q9NZJ7 389 aa17.31■□□□□ 0.36
SIKE1-208ENST00000475335 NKX1-2Q9UD57 310 aaPredicted RBP17.31■□□□□ 0.36
SIKE1-208ENST00000475335 CENPVL3A0A0U1RRI6 287 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 DNAJC9-AS1A6NH13 148 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 RFPL4AA6NLU0 287 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 RFPL4AL1F8VTS6 287 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 NXPH2O95156 264 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 GABRA2P47869 451 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 CEBPDP49716 269 aaPredicted RBP17.3■□□□□ 0.36
SIKE1-208ENST00000475335 MRPL28Q13084 256 aaKnown RBP17.3■□□□□ 0.36
SIKE1-208ENST00000475335 IL18R1Q13478 541 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 CNN3Q15417 329 aaKnown RBP17.3■□□□□ 0.36
SIKE1-208ENST00000475335 METTL11BQ5VVY1 283 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 RUSC1-AS1Q66K80 236 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 XAF1Q6GPH4 301 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 CRIP3Q6Q6R5 217 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 SETD9Q8NE22 299 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 FBLIM1Q8WUP2 373 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 RGP1Q92546 391 aaPredicted RBP17.3■□□□□ 0.36
SIKE1-208ENST00000475335 MYCBPQ99417 103 aaPredicted RBP17.3■□□□□ 0.36
SIKE1-208ENST00000475335 PRDM13Q9H4Q3 707 aa17.3■□□□□ 0.36
SIKE1-208ENST00000475335 MDFIC2A0A1B0GVS7 189 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 H0YAE9 185 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 ATF1P18846 271 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 DCKP27707 260 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 CAPGP40121 348 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 GPR157Q5UAW9 335 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 RNF144BQ7Z419 303 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 ZNF676Q8N7Q3 588 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 BORCS8Q96FH0 119 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 PDCD1LG2Q9BQ51 273 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 DCLRE1BQ9H816 532 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 DIMT1Q9UNQ2 313 aaKnown RBP17.29■□□□□ 0.36
SIKE1-208ENST00000475335 HSPE1-MOB4S4R3N1 261 aa17.29■□□□□ 0.36
SIKE1-208ENST00000475335 TMEM212A6NML5 194 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 TRIM77I1YAP6 450 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 SERPINA3P01011 423 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 KNG1P01042 644 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 MT-ND2P03891 347 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 ZNF20P17024 532 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 NDUFB7P17568 137 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 AZGP1P25311 298 aaKnown RBP17.28■□□□□ 0.36
SIKE1-208ENST00000475335 PRDX2P32119 198 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 GTF2A1P52655 376 aaPredicted RBP17.28■□□□□ 0.36
SIKE1-208ENST00000475335 BPIFB3P59826 476 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 PDCD1Q15116 288 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 SLC25A26Q70HW3 274 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 VMO1Q7Z5L0 202 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 TMEM185AQ8NFB2 350 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 OR13C3Q8NGS6 347 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 H1FXQ92522 213 aaKnown RBP17.28■□□□□ 0.36
SIKE1-208ENST00000475335 SLAMF9Q96A28 289 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 CEP19Q96LK0 163 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 ONECUT1Q9UBC0 465 aa17.28■□□□□ 0.36
SIKE1-208ENST00000475335 IGHV1-69DA0A0B4J2H0 117 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 IGHV1-69P01742 117 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 CCDC159P0C7I6 412 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 RBP2P50120 134 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 GBX2P52951 348 aaPredicted RBP17.27■□□□□ 0.36
SIKE1-208ENST00000475335 DEFB112Q30KQ8 113 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 OR2G6Q5TZ20 316 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 ZNF561Q8N587 486 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 ZNF485Q8NCK3 441 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 OR13C9Q8NGT0 318 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 HAVCR2Q8TDQ0 301 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 NRG4Q8WWG1 115 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 TNFRSF14Q92956 283 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 LHX4Q969G2 390 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 SPSB1Q96BD6 273 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 CLEC2DQ9UHP7 191 aa17.27■□□□□ 0.36
SIKE1-208ENST00000475335 CAB39Q9Y376 341 aaPredicted RBP17.27■□□□□ 0.36
SIKE1-208ENST00000475335 TRBV23-1A0A0A0MS06 115 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 CLDN34H7C241 214 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 PRKACBP22694 351 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 PRTN3P24158 256 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 DLX1P56177 255 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 CDK5R1Q15078 307 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 ASPHD2Q6ICH7 369 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 RBMS3Q6XE24 437 aaKnown RBP17.26■□□□□ 0.35
SIKE1-208ENST00000475335 PARP16Q8N5Y8 322 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 OR5AK2Q8NH90 309 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 TFAP2CQ92754 450 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 GGHQ92820 318 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 OPALINQ96PE5 141 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 DUX5Q96PT3 197 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 C19orf12Q9NSK7 152 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 IL36RNQ9UBH0 155 aa17.26■□□□□ 0.35
SIKE1-208ENST00000475335 SIRT4Q9Y6E7 314 aaPredicted RBP17.26■□□□□ 0.35
SIKE1-208ENST00000475335 IRGMA1A4Y4 181 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms