RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 ACSM1Q08AH1 577 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 TMED1Q13445 227 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 NCR3LG1Q68D85 454 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 TREML4Q6UXN2 200 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 FAM185AQ8N0U4 392 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 ZNF561Q8N587 486 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 OR10H4Q8NGA5 316 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 PKIBQ9C010 78 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 VPREB3Q9UKI3 123 aa15.14■□□□□ 0.01
COL7A1-209ENST00000474432 MEGF11A6BM72 1044 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 KCNAB3O43448 404 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 CLPXO76031 633 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 IL24Q13007 206 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 MKXQ8IYA7 352 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 TRMT10AQ8TBZ6 339 aaKnown RBP15.13■□□□□ 0.01
COL7A1-209ENST00000474432 RBM4BQ9BQ04 359 aaKnown RBP15.13■□□□□ 0.01
COL7A1-209ENST00000474432 MTCH1Q9NZJ7 389 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 POLDIP2Q9Y2S7 368 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 CAB39Q9Y376 341 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-209ENST00000474432 RNF114Q9Y508 228 aa15.13■□□□□ 0.01
COL7A1-209ENST00000474432 SYT7O43581 403 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 NXPH2O95156 264 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 TK1P04183 234 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 DLX6P56179 175 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 RPL31P62899 125 aaKnown RBP15.12■□□□□ 0.01
COL7A1-209ENST00000474432 ZNF273Q14593 569 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 TP53I3Q53FA7 332 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 GDPGP1Q6ZNW5 385 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 RDH10Q8IZV5 341 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 BEND2Q8NDZ0 799 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 OR4M1Q8NGD0 313 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 OR5D13Q8NGL4 314 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 HRASLS5Q96KN8 279 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 C16orf95Q9H693 158 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 USE1Q9NZ43 259 aa15.12■□□□□ 0.01
COL7A1-209ENST00000474432 FAM230AA0A1W2PPH8 454 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 H0YAE9 185 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 ENTPD6O75354 484 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 ZNF737O75373 536 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 CIB2O75838 187 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 TSPAN9O75954 239 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 CCL3L1P16619 93 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 PAX6P26367 422 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 CAPZA1P52907 286 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 BLMHQ13867 455 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 MIDNQ504T8 468 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 SLC25A30Q5SVS4 291 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 C17orf107Q6ZR85 190 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 TRUB1Q8WWH5 349 aaKnown RBP15.11■□□□□ 0.01
COL7A1-209ENST00000474432 CHST5Q9GZS9 411 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 MEGF9Q9H1U4 602 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 OR14J1Q9UGF5 321 aa15.11■□□□□ 0.01
COL7A1-209ENST00000474432 SF3B6Q9Y3B4 125 aaKnown RBP15.11■□□□□ 0.01
COL7A1-209ENST00000474432 IGKV1-9A0A0C4DH69 117 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 LOC107986453A0A1B0GWG9 222 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 K7N7A8 449 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 SLC1A7O00341 560 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 EI24O14681 340 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 ANGPTL7O43827 346 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 NANOS3P60323 173 aaKnown RBP15.1■□□□□ 0.01
COL7A1-209ENST00000474432 CDC42P60953 191 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 SNRPGP62308 76 aaKnown RBP15.1■□□□□ 0.01
COL7A1-209ENST00000474432 KPNB1Q14974 876 aaKnown RBP15.1■□□□□ 0.01
COL7A1-209ENST00000474432 CRIP3Q6Q6R5 217 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 OR2G2Q8NGZ5 317 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 RFKQ969G6 155 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 ADAT3Q96EY9 351 aaPredicted RBP15.1■□□□□ 0.01
COL7A1-209ENST00000474432 FAM234AQ9H0X4 552 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 AASSQ9UDR5 926 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 GNG8Q9UK08 70 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 NOTCH1P46531 2555 aa15.1■□□□□ 0.01
COL7A1-209ENST00000474432 GABRB1P18505 474 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 ATP6V1E1P36543 226 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 FUT6P51993 359 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 COL10A1Q03692 680 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 OCLNQ16625 522 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 ZIK1Q3SY52 487 aaPredicted RBP15.09■□□□□ 0.01
COL7A1-209ENST00000474432 ASPHD2Q6ICH7 369 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 FDX2Q6P4F2 183 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 BRICD5Q6PL45 260 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 TCF23Q7RTU1 214 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 CCDC54Q8NEL0 328 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 OR5R1Q8NH85 324 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 PPP1R35Q8TAP8 253 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 PIFOQ8TCI5 191 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 SLAMF9Q96A28 289 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 CEP19Q96LK0 163 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 MBOAT4Q96T53 435 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 PLEKHA1Q9HB21 404 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 FRRS1LQ9P0K9 344 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 IL36RNQ9UBH0 155 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 SLC7A11Q9UPY5 501 aa15.09■□□□□ 0.01
COL7A1-209ENST00000474432 TMEM82A0PJX8 343 aa15.08■□□□□ 0
COL7A1-209ENST00000474432 C17orf98A8MV24 154 aa15.08■□□□□ 0
COL7A1-209ENST00000474432 H3BUX3 64 aa15.08■□□□□ 0
COL7A1-209ENST00000474432 PAHP00439 452 aa15.08■□□□□ 0
COL7A1-209ENST00000474432 BMXP51813 675 aa15.08■□□□□ 0
COL7A1-209ENST00000474432 OR12D2P58182 307 aa15.08■□□□□ 0
COL7A1-209ENST00000474432 DHRS7BQ6IAN0 325 aaPredicted RBP15.08■□□□□ 0
COL7A1-209ENST00000474432 RNF144BQ7Z419 303 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms